Conservation of cofitness between PS417_27750 and PS417_26370 in Pseudomonas simiae WCS417

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27750 transcriptional regulator 1.0 PS417_26370 RNA helicase 0.21 15
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29425 cupin domain-containing protein 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29425 cupin domain-containing protein 1.00 PFLU_RS28020 ATP-dependent RNA helicase DbpA low > 109
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2130 FIG00953403: hypothetical protein 0.93 Pf1N1B4_2412 ATP-dependent 23S rRNA helicase DbpA low > 87
Pseudomonas sp. RS175 0.89 PFR28_04408 hypothetical protein 0.94 PFR28_04172 ATP-dependent RNA helicase DbpA low > 88
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_4382 FIG00953403: hypothetical protein 0.95 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA low > 103
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_803 FIG00953403: hypothetical protein 0.93 PfGW456L13_1078 ATP-dependent 23S rRNA helicase DbpA low > 87
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_09200 transcriptional regulator 0.91 AO353_07850 ATP-dependent RNA helicase low > 101
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_12575 transcriptional regulator 0.95 AO356_13770 ATP-dependent RNA helicase low > 104
Pseudomonas putida KT2440 0.85 PP_5279 conserved protein of unknown function 0.85 PP_4952 ATP-dependent RNA helicase, specific for 23S rRNA low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_0226 Protein of unknown function DUF861 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_0226 Protein of unknown function DUF861 0.88 Psyr_0516 ATP-dependent RNA helicase DbpA low > 86
Pseudomonas sp. S08-1 0.81 OH686_13640 Predicted enzyme of the cupin superfamily 0.74 OH686_14770 ATP-dependent 23S rRNA helicase DbpA low > 80
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS32850 transcriptional regulator 0.58 BPHYT_RS00150 DEAD/DEAH box helicase low > 109
Shewanella sp. ANA-3 0.62 Shewana3_3108 protein of unknown function DUF861, cupin_3 (RefSeq) 0.53 Shewana3_3384 ATP-dependent RNA helicase DbpA (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_0964 protein of unknown function DUF861, cupin_3 (RefSeq) 0.53 Shew_0598 ATP-dependent RNA helicase DbpA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.61 Sama_2651 hypothetical protein (RefSeq) 0.53 Sama_0752 ATP-dependent RNA helicase DbpA (RefSeq) low > 62
Shewanella oneidensis MR-1 0.60 SO3501 conserved hypothetical protein (NCBI ptt file) 0.53 SO0897 dbpA ATP-dependent RNA helicase DbpA (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS15290 cupin 0.58 RR42_RS00295 DEAD/DEAH box helicase low > 128
Dechlorosoma suillum PS 0.27 Dsui_0795 putative enzyme of the cupin superfamily 0.57 Dsui_2946 DNA/RNA helicase, superfamily II low > 51
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS23585 cupin domain-containing protein 0.59 QEN71_RS00065 ATP-dependent RNA helicase DbpA — —

Not shown: 6 genomes with orthologs for PS417_27750 only; 47 genomes with orthologs for PS417_26370 only