| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF114 | | COG0613, Predicted metal-dependent phosphoesterases (PHP family) | 1.0 | GFF4944 | | transcriptional regulator, TetR family | 0.85 | 1 |
| Acidovorax sp. GW101-3H11 | 0.71 | Ac3H11_1752 | | COG0613, Predicted metal-dependent phosphoesterases (PHP family) | 0.55 | Ac3H11_3732 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 79 |
| Variovorax sp. OAS795 | 0.70 | ABID97_RS22595 | | 3',5'-nucleoside bisphosphate phosphatase | 0.70 | ABID97_RS25290 | | TetR family transcriptional regulator C-terminal domain-containing protein | low | > 91 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS18495 | | PHP domain-containing protein | 0.30 | RPSI07_RS18005 | | TetR/AcrR family transcriptional regulator | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_00504 | | hypothetical protein | 0.29 | H281DRAFT_00376 | | transcriptional regulator, TetR family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS12640 | | phosphoesterase | 0.30 | BPHYT_RS13325 | | TetR family transcriptional regulator | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS06225 | | phosphoesterase | 0.27 | RR42_RS30810 | | TetR family transcriptional regulator | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS05915 | | 3',5'-nucleoside bisphosphate phosphatase | 0.29 | QEN71_RS05380 | | TetR/AcrR family transcriptional regulator | low | > 153 |
| Rahnella sp. WP5 | 0.36 | EX31_RS09950 | | PHP domain-containing protein | 0.48 | EX31_RS07030 | | TetR family transcriptional regulator | low | > 89 |
| Serratia liquefaciens MT49 | 0.34 | IAI46_14015 | | PHP domain-containing protein | 0.26 | IAI46_09055 | | HTH-type transcriptional regulator RutR | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_3586 | | Phosphoesterase PHP, N-terminal:PHP, C-terminal | 0.35 | Psyr_0675 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_3586 | | Phosphoesterase PHP, N-terminal:PHP, C-terminal | 0.35 | Psyr_0675 | | transcriptional regulator, TetR family | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.31 | GFF2721 | | COG0613, Predicted metal-dependent phosphoesterases (PHP family) | 0.26 | GFF3299 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 78 |
| Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_18520 | | phosphoesterase | 0.35 | AO353_06095 | | TetR family transcriptional regulator | low | > 101 |
| Escherichia coli ECRC102 | 0.31 | NIAGMN_26815 | yciV | 5'-3' exoribonuclease | 0.25 | NIAGMN_23725 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC101 | 0.31 | MCAODC_15620 | yciV | 5'-3' exoribonuclease | 0.25 | MCAODC_23995 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC99 | 0.31 | KEDOAH_26105 | yciV | 5'-3' exoribonuclease | 0.25 | KEDOAH_23135 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC98 | 0.31 | JDDGAC_05190 | yciV | 5'-3' exoribonuclease | 0.25 | JDDGAC_08220 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli ECRC101 | 0.31 | OKFHMN_02645 | yciV | 5'-3' exoribonuclease | 0.25 | OKFHMN_04610 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Pseudomonas sp. S08-1 | 0.31 | OH686_20795 | | Predicted metal-dependent (PHP family) | 0.33 | OH686_07330 | | Transcriptional regulator, AcrR family | low | > 80 |
| Escherichia coli BW25113 | 0.31 | b1266 | yciV | hypothetical protein (NCBI) | 0.25 | b1013 | ycdC | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.31 | NOLOHH_20305 | yciV | 5'-3' exoribonuclease | 0.25 | NOLOHH_21510 | rutR | HTH-type transcriptional regulator RutR | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.31 | OHPLBJKB_02418 | | '5'-3' exoribonuclease' transl_table=11 | 0.25 | OHPLBJKB_02653 | | HTH-type transcriptional regulator RutR | low | > 73 |
| Escherichia coli BL21 | 0.31 | ECD_01240 | | PHP domain protein | 0.25 | ECD_01016 | | rut operon transcriptional repressor for | — | — |
| Escherichia coli ECRC62 | 0.31 | BNILDI_18455 | yciV | 5'-3' exoribonuclease | 0.25 | BNILDI_19675 | rutR | HTH-type transcriptional regulator RutR | — | — |
| Escherichia coli Nissle 1917 | 0.31 | ECOLIN_RS07620 | | RNase AM | 0.25 | ECOLIN_RS05285 | | HTH-type transcriptional regulator RutR | — | — |
| Escherichia fergusonii Becca | 0.31 | EFB2_02661 | | 5'-3' exoribonuclease | 0.25 | EFB2_03067 | | HTH-type transcriptional regulator RutR | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_18495 | | phosphoesterase | 0.33 | AO356_07965 | | TetR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_5625 | | COG0613, Predicted metal-dependent phosphoesterases (PHP family) | 0.34 | Pf6N2E2_3465 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_3551 | | COG0613, Predicted metal-dependent phosphoesterases (PHP family) | 0.35 | Pf1N1B4_1241 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 87 |
| Escherichia coli ECOR38 | 0.30 | HEPCGN_25545 | yciV | 5'-3' exoribonuclease | 0.25 | HEPCGN_23530 | rutR | HTH-type transcriptional regulator RutR | low | > 85 |
| Pseudomonas simiae WCS417 | 0.30 | PS417_22275 | | phosphoesterase | 0.34 | PS417_03230 | | TetR family transcriptional regulator | low | > 88 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_03319 | | '5'-3' exoribonuclease' transl_table=11 | 0.33 | PFR28_05260 | | HTH-type transcriptional regulator RutR | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_4405 | | COG0613, Predicted metal-dependent phosphoesterases (PHP family) | 0.35 | PfGW456L13_5 | | Transcriptional regulator RutR of pyrimidine catabolism (TetR family) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.29 | Psest_1887 | | Predicted metal-dependent phosphoesterases (PHP family) | 0.33 | Psest_1439 | | Transcriptional regulator | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS23915 | | PHP domain-containing protein | 0.34 | PFLU_RS03310 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS23915 | | PHP domain-containing protein | 0.34 | PFLU_RS03310 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Alteromonas macleodii MIT1002 | 0.28 | MIT1002_01431 | | error-prone DNA polymerase | 0.32 | MIT1002_01576 | | Rut operon repressor | low | > 70 |
Not shown: 31 genomes with orthologs for GFF114 only; 2 genomes with orthologs for GFF4944 only