Conservation of cofitness between GFF7272 and GFF4909 in Variovorax sp. SCN45

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF7272 D-glucarate permease 1.0 GFF4909 Two-component transcriptional response regulator, OmpR family 0.50 14
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS04245 MFS transporter 0.37 PFLU_RS00025 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS04245 MFS transporter 0.37 PFLU_RS00025 response regulator transcription factor low > 109
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3297 D-galactarate permease 0.38 Pf6N2E2_4194 Two-component response regulator low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_07175 glucarate transporter 0.38 AO356_11620 transcriptional regulator low > 104
Pseudomonas sp. RS175 0.51 PFR28_00144 putative glucarate transporter 0.38 PFR28_04596 hypothetical protein low > 88
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.48 H281DRAFT_06535 two component transcriptional regulator, winged helix family low > 103
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_05295 glucarate transporter 0.38 AO353_10565 transcriptional regulator low > 101
Ralstonia solanacearum PSI07 0.51 RPSI07_RS03475 MFS transporter 0.46 RPSI07_RS18910 DNA-binding response regulator low > 81
Pseudomonas simiae WCS417 0.51 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.37 PS417_00025 transcriptional regulator low > 88
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS19740 MFS transporter 0.46 RALBFv3_RS14550 DNA-binding response regulator low > 76
Ralstonia solanacearum UW163 0.51 UW163_RS19435 MFS transporter 0.46 UW163_RS12015 DNA-binding response regulator
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS24150 glucarate transporter 0.47 BPHYT_RS24795 XRE family transcriptional regulator low > 109
Ralstonia solanacearum GMI1000 0.50 RS_RS21080 MFS transporter 0.45 RS_RS05330 DNA-binding response regulator low > 80
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS20330 MFS transporter 0.45 ABZR87_RS10280 response regulator transcription factor low > 80
Paraburkholderia graminis OAS925 0.50 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.47 ABIE53_006190 DNA-binding response OmpR family regulator low > 113
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS33565 MFS transporter 0.46 QEN71_RS29935 response regulator transcription factor low > 153
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS29085 glucarate transporter 0.49 RR42_RS22005 transcriptional regulator low > 128
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_1108 D-galactarate permease 0.37 Pf1N1B4_1925 Two-component response regulator low > 87
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_01039 putative hexuronate transporter, major facilitator superfamily 0.41 CCNA_03434 two-component response regulator low > 67
Caulobacter crescentus NA1000 0.15 CCNA_01039 putative hexuronate transporter, major facilitator superfamily 0.41 CCNA_03434 two-component response regulator low > 66

Not shown: 41 genomes with orthologs for GFF7272 only; 4 genomes with orthologs for GFF4909 only