Conservation of cofitness between PS417_00900 and PS417_23730 in Pseudomonas simiae WCS417

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00900 4-aminobutyrate aminotransferase 1.0 PS417_23730 LysR family transcriptional regulator 0.31 2
Pseudomonas fluorescens SBW25 1.00 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.99 PFLU_RS25545 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.99 PFLU_RS25545 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.94 Pf1N1B4_1230 Transcriptional regulator, LysR family low > 87
Pseudomonas sp. RS175 0.95 PFR28_04756 5-aminovalerate aminotransferase DavT 0.92 PFR28_00012 HTH-type transcriptional regulator HdfR low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.94 PfGW456L13_5147 Transcriptional regulator, LysR family low > 87
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_10715 4-aminobutyrate aminotransferase 0.93 AO356_07875 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.94 AO353_05995 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.92 Pf6N2E2_3453 Transcriptional regulator, LysR family low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.87 Psyr_0688 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.87 Psyr_0688 transcriptional regulator, LysR family low > 86
Pseudomonas putida KT2440 0.87 PP_0214 4-aminobutyrate aminotransferase 0.88 PP_4668 Transcriptional regulator, LysR family low > 96
Pseudomonas stutzeri RCH2 0.86 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 0.44 Psest_2435 Transcriptional regulator low > 67
Pseudomonas sp. S08-1 0.80 OH686_11880 4-aminobutyrate transaminase 0.41 OH686_05860 Transcriptional regulator, LysR family low > 80
Variovorax sp. OAS795 0.68 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.39 ABID97_RS19430 LysR family transcriptional regulator low > 91
Acidovorax sp. GW101-3H11 0.66 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.37 Ac3H11_2356 Transcriptional regulator, LysR family low > 79
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS26240 4-aminobutyrate aminotransferase 0.66 RR42_RS25625 LysR family transcriptional regulator low > 128
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS05420 4-aminobutyrate aminotransferase 0.50 HSERO_RS15405 LysR family transcriptional regulator low > 78
Acinetobacter radioresistens SK82 0.55 MPMX26_01998 4-aminobutyrate aminotransferase PuuE 0.37 MPMX26_01551 HTH-type transcriptional regulator HdfR
Variovorax sp. SCN45 0.55 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.39 GFF7376 Transcriptional regulator, LysR family low > 127
Sinorhizobium meliloti 1021 0.54 SM_b21186 4-aminobutyrate aminotransferase 0.36 SMc03122 transcriptional regulator low > 103
Rhizobium sp. OAE497 0.53 ABIE40_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.35 ABIE40_RS24795 LysR family transcriptional regulator low > 107
Castellaniella sp019104865 MT123 0.52 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase 0.53 ABCV34_RS08285 LysR family transcriptional regulator low > 48
Rhodopseudomonas palustris CGA009 0.52 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase 0.31 TX73_017515 LysR family transcriptional regulator low > 86

Not shown: 44 genomes with orthologs for PS417_00900 only; 5 genomes with orthologs for PS417_23730 only