Conservation of cofitness between PS417_23390 and PS417_23370 in Pseudomonas simiae WCS417

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23390 ubiquinol oxidase subunit II 1.0 PS417_23370 protoheme IX farnesyltransferase 0.90 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 0.94 2
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 0.97 1
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.98 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.97 1
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15450 ubiquinol oxidase subunit II 0.98 AO353_15470 protoheme IX farnesyltransferase 0.90 2
Pseudomonas putida KT2440 0.72 PP_0812 cytochrome bo terminal oxidase subunit II 0.81 PP_0816 protoheme IX farnesyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_16960 ubiquinol oxidase subunit II 0.96 AO356_16980 protoheme IX farnesyltransferase 0.87 2
Pseudomonas sp. RS175 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.96 PFR28_00246 Protoheme IX farnesyltransferase 0.40 5
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.96 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.90 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.90 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.97 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.96 4
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.90 Psyr_1145 Protoheme IX farnesyltransferase — —
Pantoea sp. MT58 0.58 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.72 IAI47_14700 protoheme IX farnesyltransferase 0.91 2
Pectobacterium carotovorum WPP14 0.57 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 0.70 HER17_RS15895 heme o synthase 0.85 1
Erwinia tracheiphila SCR3 0.57 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.70 LU632_RS18395 cyoE heme o synthase — —
Dickeya dianthicola ME23 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.69 DZA65_RS05965 protoheme IX farnesyltransferase 0.47 8
Dickeya dianthicola 67-19 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.69 HGI48_RS05640 protoheme IX farnesyltransferase 0.51 50
Dickeya dadantii 3937 0.56 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.69 DDA3937_RS05595 protoheme IX farnesyltransferase low > 74
Escherichia coli BW25113 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.68 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.95 1
Escherichia coli ECRC101 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 MCAODC_27605 cyoE heme o synthase — —
Escherichia coli ECOR38 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 HEPCGN_06995 cyoE heme o synthase low > 85
Escherichia coli ECRC102 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 NIAGMN_06435 cyoE heme o synthase — —
Escherichia fergusonii Becca 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.68 EFB2_03629 Protoheme IX farnesyltransferase low > 86
Escherichia coli ECRC98 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 JDDGAC_12035 cyoE heme o synthase — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.68 ECOLIN_RS02575 heme o synthase 0.75 45
Escherichia coli ECRC99 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 KEDOAH_19585 cyoE heme o synthase — —
Escherichia coli ECRC101 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 OKFHMN_08380 cyoE heme o synthase — —
Escherichia coli ECRC62 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 BNILDI_22730 cyoE heme o synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.68 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.83 6
Escherichia coli ECOR27 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.68 NOLOHH_01315 cyoE heme o synthase low > 57
Escherichia coli BL21 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.68 ECD_00379 protoheme IX farnesyltransferase 0.89 3
Serratia liquefaciens MT49 0.53 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.70 IAI46_04965 protoheme IX farnesyltransferase 0.75 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.68 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.80 2
Shewanella loihica PV-4 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.54 Shew_0370 protoheme IX farnesyltransferase (RefSeq) low > 60
Klebsiella michiganensis M5al 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.68 BWI76_RS06475 protoheme IX farnesyltransferase 0.64 3
Rahnella sp. WP5 0.53 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.69 EX31_RS22200 protoheme IX farnesyltransferase 0.97 1
Enterobacter sp. TBS_079 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.69 MPMX20_01019 Protoheme IX farnesyltransferase 0.84 2
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.68 EX28DRAFT_2543 protoheme IX farnesyltransferase 0.90 1
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.56 MIT1002_03925 Protoheme IX farnesyltransferase low > 70
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.60 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) 0.63 7
Acinetobacter radioresistens SK82 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.46 MPMX26_01158 Protoheme IX farnesyltransferase 0.94 2

Not shown: 15 genomes with orthologs for PS417_23390 only; 1 genomes with orthologs for PS417_23370 only