Conservation of cofitness between PS417_23380 and PS417_23370 in Pseudomonas simiae WCS417

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23380 cytochrome o ubiquinol oxidase subunit III 1.0 PS417_23370 protoheme IX farnesyltransferase 0.81 3
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 0.92 3
Pseudomonas fluorescens SBW25 1.00 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 0.94 3
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.97 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.97 4
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.98 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.94 4
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.96 AO356_16980 protoheme IX farnesyltransferase 0.89 2
Pseudomonas sp. RS175 0.80 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.96 PFR28_00246 Protoheme IX farnesyltransferase 0.36 3
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.98 AO353_15470 protoheme IX farnesyltransferase 0.94 2
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.96 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.94 3
Klebsiella michiganensis M5al 0.73 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III 0.68 BWI76_RS06475 protoheme IX farnesyltransferase 0.56 4
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 0.90 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 0.90 Psyr_1145 Protoheme IX farnesyltransferase — —
Erwinia tracheiphila SCR3 0.71 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III 0.70 LU632_RS18395 cyoE heme o synthase — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III 0.68 EX28DRAFT_2543 protoheme IX farnesyltransferase 0.80 3
Escherichia coli Nissle 1917 0.70 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III 0.68 ECOLIN_RS02575 heme o synthase 0.86 4
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.68 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.82 3
Escherichia coli ECRC62 0.70 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 BNILDI_22730 cyoE heme o synthase — —
Escherichia coli BL21 0.70 ECD_00381 cytochrome o ubiquinol oxidase subunit III 0.68 ECD_00379 protoheme IX farnesyltransferase 0.93 2
Escherichia coli ECOR27 0.70 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 NOLOHH_01315 cyoE heme o synthase low > 57
Escherichia coli BW25113 0.70 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.68 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.92 3
Escherichia coli ECOR38 0.70 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 HEPCGN_06995 cyoE heme o synthase low > 85
Pantoea sp. MT58 0.70 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.72 IAI47_14700 protoheme IX farnesyltransferase 0.92 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.68 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.87 2
Escherichia fergusonii Becca 0.70 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.68 EFB2_03629 Protoheme IX farnesyltransferase low > 86
Rahnella sp. WP5 0.70 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.69 EX31_RS22200 protoheme IX farnesyltransferase 0.96 3
Escherichia coli ECRC101 0.70 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 MCAODC_27605 cyoE heme o synthase — —
Escherichia coli ECRC99 0.70 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 KEDOAH_19585 cyoE heme o synthase — —
Escherichia coli ECRC98 0.70 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 JDDGAC_12035 cyoE heme o synthase — —
Escherichia coli ECRC101 0.70 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 OKFHMN_08380 cyoE heme o synthase — —
Escherichia coli ECRC102 0.70 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III 0.68 NIAGMN_06435 cyoE heme o synthase — —
Pseudomonas putida KT2440 0.69 PP_0814 cytochrome bo terminal oxidase subunit III 0.81 PP_0816 protoheme IX farnesyltransferase — —
Serratia liquefaciens MT49 0.67 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.70 IAI46_04965 protoheme IX farnesyltransferase 0.69 7
Pectobacterium carotovorum WPP14 0.67 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.70 HER17_RS15895 heme o synthase 0.73 34
Dickeya dianthicola ME23 0.67 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III 0.69 DZA65_RS05965 protoheme IX farnesyltransferase 0.35 58
Dickeya dadantii 3937 0.67 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III 0.69 DDA3937_RS05595 protoheme IX farnesyltransferase — —
Dickeya dianthicola 67-19 0.66 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III 0.69 HGI48_RS05640 protoheme IX farnesyltransferase 0.72 4
Enterobacter sp. TBS_079 0.64 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.69 MPMX20_01019 Protoheme IX farnesyltransferase 0.69 3
Shewanella sp. ANA-3 0.61 Shewana3_4033 cytochrome c oxidase, subunit III (RefSeq) 0.60 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) 0.65 26
Shewanella loihica PV-4 0.60 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) 0.54 Shew_0370 protoheme IX farnesyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.59 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 0.56 MIT1002_03925 Protoheme IX farnesyltransferase low > 70
Acinetobacter radioresistens SK82 0.53 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.46 MPMX26_01158 Protoheme IX farnesyltransferase 0.87 3

Not shown: 28 genomes with orthologs for PS417_23380 only; 1 genomes with orthologs for PS417_23370 only