Conservation of cofitness between PS417_23375 and PS417_23370 in Pseudomonas simiae WCS417

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23375 cytochrome C oxidase 1.0 PS417_23370 protoheme IX farnesyltransferase 0.84 3
Pseudomonas fluorescens SBW25 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 0.94 1
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 0.99 PFLU_RS25200 protoheme IX farnesyltransferase 0.91 2
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_970 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.97 Pf1N1B4_969 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.97 4
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_16975 cytochrome C oxidase 0.96 AO356_16980 protoheme IX farnesyltransferase 0.90 2
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5320 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.96 Pf6N2E2_5321 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.95 2
Pseudomonas sp. RS175 0.82 PFR28_00245 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.96 PFR28_00246 Protoheme IX farnesyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4933 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.98 PfGW456L13_4932 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.95 1
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_15465 cytochrome C oxidase 0.98 AO353_15470 protoheme IX farnesyltransferase 0.92 2
Pseudomonas putida KT2440 0.68 PP_0815 cytochrome bo terminal oxidase subunit IV 0.81 PP_0816 protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.90 Psyr_1145 Protoheme IX farnesyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.90 Psyr_1145 Protoheme IX farnesyltransferase — —
Dickeya dadantii 3937 0.53 DDA3937_RS05600 cytochrome o ubiquinol oxidase subunit IV 0.69 DDA3937_RS05595 protoheme IX farnesyltransferase — —
Dickeya dianthicola 67-19 0.53 HGI48_RS05645 cytochrome o ubiquinol oxidase subunit IV 0.69 HGI48_RS05640 protoheme IX farnesyltransferase — —
Dickeya dianthicola ME23 0.53 DZA65_RS05970 cytochrome o ubiquinol oxidase subunit IV 0.69 DZA65_RS05965 protoheme IX farnesyltransferase — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS15890 cytochrome o ubiquinol oxidase subunit IV 0.70 HER17_RS15895 heme o synthase 0.72 63
Serratia liquefaciens MT49 0.49 IAI46_04970 cytochrome o ubiquinol oxidase subunit IV 0.70 IAI46_04965 protoheme IX farnesyltransferase 0.57 5
Rahnella sp. WP5 0.49 EX31_RS22205 cytochrome o ubiquinol oxidase subunit IV 0.69 EX31_RS22200 protoheme IX farnesyltransferase 0.97 2
Pantoea sp. MT58 0.49 IAI47_14695 cytochrome o ubiquinol oxidase subunit IV 0.72 IAI47_14700 protoheme IX farnesyltransferase 0.90 2
Shewanella loihica PV-4 0.48 Shew_0369 cytochrome C oxidase subunit IV (RefSeq) 0.54 Shew_0370 protoheme IX farnesyltransferase (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.48 MPMX26_01159 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.46 MPMX26_01158 Protoheme IX farnesyltransferase 0.88 2
Shewanella sp. ANA-3 0.47 Shewana3_4034 cytochrome C oxidase subunit IV (RefSeq) 0.60 Shewana3_4035 protoheme IX farnesyltransferase (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.47 LU632_RS18390 cytochrome o ubiquinol oxidase subunit IV 0.70 LU632_RS18395 cyoE heme o synthase — —
Escherichia fergusonii Becca 0.47 EFB2_03628 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.68 EFB2_03629 Protoheme IX farnesyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03244 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.68 OHPLBJKB_03245 Protoheme IX farnesyltransferase 0.55 15
Escherichia coli ECRC102 0.46 NIAGMN_06430 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 NIAGMN_06435 cyoE heme o synthase — —
Escherichia coli ECRC62 0.46 BNILDI_22725 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 BNILDI_22730 cyoE heme o synthase — —
Escherichia coli ECRC101 0.46 MCAODC_27600 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 MCAODC_27605 cyoE heme o synthase — —
Escherichia coli ECRC101 0.46 OKFHMN_08375 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 OKFHMN_08380 cyoE heme o synthase — —
Escherichia coli ECRC99 0.46 KEDOAH_19590 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 KEDOAH_19585 cyoE heme o synthase — —
Escherichia coli ECOR27 0.46 NOLOHH_01310 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 NOLOHH_01315 cyoE heme o synthase low > 57
Escherichia coli BL21 0.46 ECD_00380 cytochrome o ubiquinol oxidase subunit IV 0.68 ECD_00379 protoheme IX farnesyltransferase 0.65 4
Escherichia coli ECOR38 0.46 HEPCGN_06990 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 HEPCGN_06995 cyoE heme o synthase low > 85
Escherichia coli BW25113 0.46 b0429 cyoD cytochrome o ubiquinol oxidase subunit IV (NCBI) 0.68 b0428 cyoE protoheme IX farnesyltransferase (NCBI) 0.93 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4343 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.68 GFF4342 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 0.83 3
Escherichia coli ECRC98 0.46 JDDGAC_12030 cyoD cytochrome o ubiquinol oxidase subunit III 0.68 JDDGAC_12035 cyoE heme o synthase — —
Alteromonas macleodii MIT1002 0.46 MIT1002_03926 Cytochrome o ubiquinol oxidase protein CyoD 0.56 MIT1002_03925 Protoheme IX farnesyltransferase low > 70
Escherichia coli Nissle 1917 0.46 ECOLIN_RS02580 cytochrome o ubiquinol oxidase subunit IV 0.68 ECOLIN_RS02575 heme o synthase 0.93 2
Enterobacter sp. TBS_079 0.45 MPMX20_01020 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.69 MPMX20_01019 Protoheme IX farnesyltransferase 0.56 3
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2542 cytochrome o ubiquinol oxidase subunit IV 0.68 EX28DRAFT_2543 protoheme IX farnesyltransferase — —
Klebsiella michiganensis M5al 0.43 BWI76_RS06480 cytochrome o ubiquinol oxidase subunit IV 0.68 BWI76_RS06475 protoheme IX farnesyltransferase — —

Not shown: 24 genomes with orthologs for PS417_23375 only; 1 genomes with orthologs for PS417_23370 only