Conservation of cofitness between PS417_23390 and PS417_22065 in Pseudomonas simiae WCS417

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23390 ubiquinol oxidase subunit II 1.0 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.36 20
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.99 PFLU_RS23680 long-chain fatty acid--CoA ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.99 PFLU_RS23680 long-chain fatty acid--CoA ligase low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.93 PfGW456L13_1911 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15450 ubiquinol oxidase subunit II 0.94 AO353_03310 long-chain fatty acid--CoA ligase low > 101
Pseudomonas putida KT2440 0.72 PP_0812 cytochrome bo terminal oxidase subunit II 0.90 PP_4549 long-chain-fatty-acid/CoA ligase — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_16960 ubiquinol oxidase subunit II 0.94 AO356_05100 long-chain fatty acid--CoA ligase 0.26 61
Pseudomonas sp. RS175 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.94 PFR28_00585 Long-chain-fatty-acid--CoA ligase low > 88
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.95 Pf6N2E2_2872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 103
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.90 Psyr_3834 AMP-dependent synthetase and ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.90 Psyr_3834 AMP-dependent synthetase and ligase — —
Pantoea sp. MT58 0.58 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.55 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD low > 76
Pectobacterium carotovorum WPP14 0.57 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 0.54 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.54 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.53 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD low > 75
Escherichia coli ECOR38 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD low > 85
Escherichia fergusonii Becca 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.55 EFB2_02195 Long-chain-fatty-acid--CoA ligase low > 86
Escherichia coli ECRC101 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli BW25113 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.55 b1805 fadD acyl-CoA synthase (NCBI) low > 76
Escherichia coli ECRC102 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC99 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.55 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC101 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC98 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.55 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase low > 73
Escherichia coli BL21 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.55 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) low > 60
Escherichia coli ECOR27 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC62 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.55 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD — —
Shewanella loihica PV-4 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.51 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.55 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 78
Serratia liquefaciens MT49 0.53 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.55 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD low > 86
Rahnella sp. WP5 0.53 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.54 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD low > 89
Klebsiella michiganensis M5al 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.55 BWI76_RS17800 long-chain-fatty-acid--CoA ligase low > 92
Enterobacter sp. TBS_079 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.56 MPMX20_02711 Long-chain-fatty-acid--CoA ligase low > 85
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.55 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 76
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.50 MIT1002_02588 Long-chain-fatty-acid--CoA ligase low > 70
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.51 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) 0.47 64
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS07625 ubiquinol oxidase subunit II 0.53 ABZR86_RS02155 AMP-binding protein low > 74
Acinetobacter radioresistens SK82 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.48 MPMX26_00141 Long-chain-fatty-acid--CoA ligase low > 36

Not shown: 17 genomes with orthologs for PS417_23390 only; 17 genomes with orthologs for PS417_22065 only