Conservation of cofitness between Psest_1717 and Psest_4350 in Pseudomonas stutzeri RCH2

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1717 benzoate transporter 1.0 Psest_4350 Transcriptional regulators of sugar metabolism 0.20 5
Pseudomonas putida KT2440 0.75 PP_1820 Benzoate transport protein 0.81 PP_5410 Transcriptional regulator, DeoR family low > 96
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_3848 Benzoate transport protein 0.82 Pf1N1B4_1946 Transcriptional regulator of glmS gene, DeoR family low > 87
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_02585 hypothetical protein 0.82 AO356_11735 XRE family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2341 Benzoate transport protein 0.82 Pf6N2E2_4216 Transcriptional regulator of glmS gene, DeoR family low > 103
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_00755 hypothetical protein 0.82 AO353_10375 XRE family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4089 Benzoate transport protein 0.80 PfGW456L13_685 Transcriptional regulator of glmS gene, DeoR family low > 87
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter 0.82 PFLU_RS30105 DeoR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter 0.82 PFLU_RS30105 DeoR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.72 PS417_20910 membrane protein 0.82 PS417_28450 XRE family transcriptional regulator low > 88
Pseudomonas sp. S08-1 0.72 OH686_00595 Benzoate transport protein 0.81 OH686_12730 Transcriptional regulator of glmS gene, DeoR family low > 80
Pseudomonas sp. RS175 0.71 PFR28_01059 Inner membrane protein YdcO 0.82 PFR28_04573 Glucitol operon repressor low > 88
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1839 Benzoate membrane transport protein 0.82 Psyr_5118 transcriptional regulator, DeoR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1839 Benzoate membrane transport protein 0.82 Psyr_5118 transcriptional regulator, DeoR family low > 86
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS24590 benzoate/H(+) symporter BenE family transporter 0.18 QEN71_RS36660 DeoR/GlpR family DNA-binding transcription regulator low > 153
Shewanella sp. ANA-3 0.49 Shewana3_0320 benzoate transporter (RefSeq) 0.69 Shewana3_4126 DeoR family transcriptional regulator (RefSeq) low > 73
Rahnella sp. WP5 0.47 EX31_RS05715 benzoate/H(+) symporter BenE family transporter 0.37 EX31_RS03335 DNA-binding transcriptional repressor low > 89
Serratia liquefaciens MT49 0.46 IAI46_11435 benzoate/H(+) symporter BenE family transporter 0.38 IAI46_19080 DNA-binding transcriptional repressor low > 86
Escherichia coli ECRC100 0.45 OKFHMN_01610 ydcO BenE family transporter YdcO 0.39 OKFHMN_20660 srlR glucitol operon DNA-binding transcriptional repressor SrlR low > 80
Pectobacterium carotovorum WPP14 0.45 HER17_RS21705 benzoate/H(+) symporter BenE family transporter 0.20 HER17_RS00570 DeoR/GlpR family DNA-binding transcription regulator low > 75
Escherichia coli BW25113 0.45 b1433 b1433 putative membrane transport protein (VIMSS) 0.38 b2707 srlR DNA-bindng transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC102 0.45 NIAGMN_25745 ydcO BenE family transporter YdcO 0.39 NIAGMN_18430 srlR glucitol operon DNA-binding transcriptional repressor SrlR
Escherichia coli BL21 0.45 ECD_01391 BenE family inner membrane putative transporter 0.38 ECD_02557 sorbitol-inducible srl operon transcriptional repressor low > 61
Escherichia coli ECRC99 0.45 KEDOAH_26830 ydcO BenE family transporter YdcO 0.39 KEDOAH_07475 srlR glucitol operon DNA-binding transcriptional repressor SrlR
Escherichia coli ECOR27 0.45 NOLOHH_19285 ydcO BenE family transporter YdcO 0.38 NOLOHH_12505 srlR glucitol operon DNA-binding transcriptional repressor SrlR low > 75
Escherichia coli ECRC98 0.45 JDDGAC_04100 ydcO BenE family transporter YdcO 0.39 JDDGAC_24325 srlR glucitol operon DNA-binding transcriptional repressor SrlR 0.53 39
Escherichia coli ECOR38 0.45 HEPCGN_26210 ydcO BenE family transporter YdcO 0.38 HEPCGN_19860 srlR glucitol operon DNA-binding transcriptional repressor SrlR low > 87
Escherichia coli Nissle 1917 0.45 ECOLIN_RS08270 BenE family transporter YdcO 0.38 ECOLIN_RS15100 glucitol operon DNA-binding transcriptional repressor SrlR
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02282 Inner membrane protein YdcO 0.38 OHPLBJKB_01027 Glucitol operon repressor low > 73
Escherichia fergusonii Becca 0.45 EFB2_02549 Inner membrane protein YdcO 0.38 EFB2_01217 Glucitol operon repressor low > 86
Escherichia coli ECRC62 0.45 BNILDI_17735 ydcO BenE family transporter YdcO 0.38 BNILDI_11065 srlR glucitol operon DNA-binding transcriptional repressor SrlR low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2596 Benzoate transport protein 0.38 GFF4701 Glucitol operon repressor low > 78
Klebsiella michiganensis M5al 0.41 BWI76_RS13360 benzoate transporter 0.38 BWI76_RS22240 transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.40 MPMX20_02242 Inner membrane protein YdcO 0.38 MPMX20_03591 Glucitol operon repressor low > 85
Enterobacter asburiae PDN3 0.39 EX28DRAFT_1224 benzoate transporter 0.38 EX28DRAFT_2796 transcriptional regulator, DeoR family low > 76
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_09835 benzoate transporter 0.67 CSW01_02580 DeoR/GlpR transcriptional regulator low > 62

Not shown: 21 genomes with orthologs for Psest_1717 only; 16 genomes with orthologs for Psest_4350 only