Conservation of cofitness between PS417_26545 and PS417_02145 in Pseudomonas simiae WCS417

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26545 16S rRNA methyltransferase 1.0 PS417_02145 potassium transporter KefA 0.20 16
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.91 PFLU_RS02200 mechanosensitive channel MscK low > 109
Pseudomonas fluorescens SBW25 0.93 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.91 PFLU_RS02200 mechanosensitive channel MscK low > 109
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_08050 16S rRNA methyltransferase 0.81 AO353_12775 potassium transporter KefA low > 101
Pseudomonas sp. RS175 0.89 PFR28_04209 Ribosomal RNA small subunit methyltransferase E 0.83 PFR28_05044 Mechanosensitive channel MscK low > 88
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_13565 16S rRNA methyltransferase 0.83 AO356_09045 potassium transporter KefA low > 104
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2376 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.84 Pf1N1B4_1497 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel — —
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_4630 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.83 Pf6N2E2_3691 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel low > 103
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.82 PfGW456L13_230 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.77 Psyr_0501 MscS Mechanosensitive ion channel low > 86
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.77 Psyr_0501 MscS Mechanosensitive ion channel low > 86
Pseudomonas putida KT2440 0.84 PP_4985 16S rRNA m3U1498 methyltransferase 0.75 PP_5067 mechanosensitive channel protein, intermediate (smaller, MscS-like) conductance, K+ efflux low > 96
Pseudomonas sp. S08-1 0.83 OH686_10855 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.57 OH686_09800 Mechanosensitive channel MscK low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_0305 RNA methyltransferase, RsmE family 0.60 Psest_0397 Small-conductance mechanosensitive channel low > 67
Erwinia tracheiphila SCR3 0.45 LU632_RS05485 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.14 LU632_RS01935 mscM miniconductance mechanosensitive channel MscM low > 74
Rahnella sp. WP5 0.43 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.33 EX31_RS22485 mechanosensitive channel MscK low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 0.33 GFF4382 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel low > 78
Escherichia coli ECRC101 0.42 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 MCAODC_27415 mscK mechanosensitive channel MscK — —
Escherichia coli BL21 0.42 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 0.34 ECD_00416 mechanosensitive channel protein, intermediate conductance, K+ regulated low > 60
Escherichia coli ECOR38 0.42 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E 0.34 HEPCGN_06805 mscK mechanosensitive channel MscK low > 85
Escherichia coli ECRC62 0.42 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 BNILDI_22540 mscK mechanosensitive channel MscK — —
Escherichia fergusonii Becca 0.42 EFB2_00956 Ribosomal RNA small subunit methyltransferase E 0.34 EFB2_03593 Mechanosensitive channel MscK low > 86
Escherichia coli BW25113 0.42 b2946 yggJ orf, hypothetical protein (VIMSS) 0.34 b0465 kefA fused conserved protein (NCBI) low > 76
Escherichia coli ECRC102 0.42 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 NIAGMN_06245 mscK mechanosensitive channel MscK — —
Escherichia coli ECRC98 0.42 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 JDDGAC_11840 mscK mechanosensitive channel MscK — —
Escherichia coli ECRC99 0.42 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 KEDOAH_19775 mscK mechanosensitive channel MscK — —
Escherichia coli Nissle 1917 0.42 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 ECOLIN_RS02765 mechanosensitive channel MscK low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E 0.34 OHPLBJKB_03209 Mechanosensitive channel MscK low > 73
Escherichia coli ECRC101 0.42 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 OKFHMN_08190 mscK mechanosensitive channel MscK — —
Escherichia coli ECOR27 0.42 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 NOLOHH_01125 mscK mechanosensitive channel MscK low > 57
Shewanella loihica PV-4 0.42 Shew_3224 hypothetical protein (RefSeq) 0.18 Shew_0555 MscS mechanosensitive ion channel (RefSeq) low > 60
Pantoea sp. MT58 0.42 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.16 IAI47_02525 miniconductance mechanosensitive channel MscM low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.35 DZA65_RS06130 mechanosensitive channel MscK low > 75
Dickeya dadantii 3937 0.42 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.35 DDA3937_RS05750 mechanosensitive channel MscK low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 HGI48_RS05805 mechanosensitive channel MscK low > 71
Serratia liquefaciens MT49 0.42 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 IAI46_05205 mechanosensitive channel MscK low > 86
Klebsiella michiganensis M5al 0.41 BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.34 BWI76_RS06790 mechanosensitive channel MscK low > 92
Pectobacterium carotovorum WPP14 0.41 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.16 HER17_RS02400 miniconductance mechanosensitive channel MscM low > 75
Enterobacter sp. TBS_079 0.40 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E 0.34 MPMX20_01067 Mechanosensitive channel MscK low > 85
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2984 RNA methyltransferase, RsmE family 0.31 EX28DRAFT_2493 Small-conductance mechanosensitive channel low > 76

Not shown: 60 genomes with orthologs for PS417_26545 only; 0 genomes with orthologs for PS417_02145 only