Conservation of cofitness between GFF573 and GFF4043 in Hydrogenophaga sp. GW460-11-11-14-LB1

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF573 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 1.0 GFF4043 ATP-dependent Clp protease ATP-binding subunit ClpX 0.53 19
Variovorax sp. SCN45 0.63 GFF4460 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 0.88 GFF488 ATP-dependent Clp protease ATP-binding subunit ClpX low > 127
Variovorax sp. OAS795 0.62 ABID97_RS06280 phosphatidate cytidylyltransferase 0.88 ABID97_RS17595 ATP-dependent Clp protease ATP-binding subunit ClpX low > 91
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4049 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 0.89 Ac3H11_936 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Rhizobium sp. OAE497 0.37 ABIE40_RS21845 phosphatidate cytidylyltransferase 0.67 ABIE40_RS07095 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.668.1 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 0.70 Xcc-8004.4047.1 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Pseudomonas simiae WCS417 0.37 PS417_28415 phosphatidate cytidylyltransferase 0.70 PS417_17230 Clp protease ATP-binding protein — —
Pseudomonas sp. RS175 0.36 PFR28_03926 hypothetical protein 0.70 PFR28_01229 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS30080 phosphatidate cytidylyltransferase 0.70 PFLU_RS19165 ATP-dependent Clp protease ATP-binding subunit ClpX low > 109
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1948 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 0.70 Pf1N1B4_3946 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS30080 phosphatidate cytidylyltransferase 0.70 PFLU_RS19165 ATP-dependent Clp protease ATP-binding subunit ClpX low > 109
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4949 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 0.70 Pf6N2E2_2217 ATP-dependent Clp protease ATP-binding subunit ClpX low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15080 phosphatidate cytidylyltransferase 0.70 AO356_01745 ATP-dependent Clp protease ATP-binding subunit ClpX low > 104
Pseudomonas sp. S08-1 0.35 OH686_12610 Phosphatidate cytidylyltransferase 0.70 OH686_03640 ATP-dependent Clp protease, ATP-binding subunit ClpX low > 80
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS31010 phosphatidate cytidylyltransferase 0.77 RR42_RS09025 Clp protease ATP-binding protein — —
Azospirillum sp. SherDot2 0.33 MPMX19_03468 hypothetical protein 0.68 MPMX19_01547 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Sinorhizobium meliloti 1021 0.33 SMc02157 hypothetical protein 0.68 SMc01904 ATP-dependent protease ATP-binding subunit ClpX — —
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS00375 phosphatidate cytidylyltransferase 0.78 HSERO_RS12910 ATP-dependent protease — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_0185 phosphatidate cytidylyltransferase (RefSeq) 0.67 Dshi_1387 ATP-dependent Clp protease, ATP-binding subunit ClpX (RefSeq) low > 64
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_1025 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 0.68 B158DRAFT_1037 endopeptidase Clp ATP-binding regulatory subunit (clpX) low > 40
Vibrio cholerae E7946 ATCC 55056 0.19 CSW01_09680 phosphatidate cytidylyltransferase 0.68 CSW01_09610 ATP-dependent Clp protease ATP-binding subunit ClpX — —
Bacteroides ovatus ATCC 8483 0.19 BACOVA_05270 phosphatidate cytidylyltransferase 0.48 BACOVA_00336 ATP-dependent Clp protease, ATP-binding subunit ClpX low > 94
Bacteroides thetaiotaomicron VPI-5482 0.18 BT4463 phosphatidate cytidylyltransferase (NCBI ptt file) 0.48 BT3843 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) low > 81
Escherichia coli ECOR27 0.16 NOLOHH_19410 ynbB Uncharacterized protein YnbB 0.70 NOLOHH_01265 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_02305 hypothetical protein 0.70 OHPLBJKB_03235 ATP-dependent Clp protease ATP-binding subunit ClpX low > 73
Escherichia coli BW25113 0.16 b1409 ynbB predicted CDP-diglyceride synthase (NCBI) 0.70 b0438 clpX ATP-dependent protease ATP-binding subunit (NCBI) low > 76
Escherichia coli BL21 0.15 ECD_01364 putative CDP-diglyceride synthase 0.70 ECD_00389 ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease — —
Escherichia coli ECRC101 0.15 OKFHMN_01750 ynbB Uncharacterized protein YnbB 0.70 OKFHMN_08330 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC62 0.15 BNILDI_17865 ynbB Uncharacterized protein YnbB 0.70 BNILDI_22680 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC98 0.15 JDDGAC_04240 ynbB Uncharacterized protein YnbB 0.70 JDDGAC_11985 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC101 0.15 MCAODC_16185 ynbB Uncharacterized protein YnbB 0.70 MCAODC_27555 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC102 0.15 NIAGMN_25885 ynbB Uncharacterized protein YnbB 0.70 NIAGMN_06385 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECRC99 0.15 KEDOAH_26685 ynbB Uncharacterized protein YnbB 0.70 KEDOAH_19635 clpX ATP-dependent protease ATP-binding subunit ClpX — —
Escherichia coli ECOR38 0.15 HEPCGN_26090 ynbB Uncharacterized protein YnbB 0.70 HEPCGN_06945 clpX ATP-dependent protease ATP-binding subunit ClpX low > 85
Escherichia fergusonii Becca 0.14 EFB2_02569 hypothetical protein 0.70 EFB2_03619 ATP-dependent Clp protease ATP-binding subunit ClpX low > 86
Escherichia coli Nissle 1917 0.14 ECOLIN_RS08160 phosphatidate cytidylyltransferase 0.70 ECOLIN_RS02630 ATP-dependent protease ATP-binding subunit ClpX — —

Not shown: 0 genomes with orthologs for GFF573 only; 65 genomes with orthologs for GFF4043 only