Conservation of cofitness between PS417_04025 and PS417_20155 in Pseudomonas simiae WCS417

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04025 glycine/betaine ABC transporter permease 1.0 PS417_20155 23S rRNA methyltransferase 0.19 20
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS04065 ABC transporter permease 0.94 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS04065 ABC transporter permease 0.94 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 109
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_4252 Binding-protein-dependent transport systems inner membrane component 0.76 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_4252 Binding-protein-dependent transport systems inner membrane component 0.76 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1131 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.87 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.23 31
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_05425 glycine/betaine ABC transporter permease 0.82 AO353_02715 23S rRNA methyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_5062 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.84 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 low > 87
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_07290 glycine/betaine ABC transporter permease 0.84 AO356_19055 23S rRNA methyltransferase low > 104
Pseudomonas sp. RS175 0.82 PFR28_00117 Osmoprotectant import permease protein OsmY 0.84 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 88
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3330 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.85 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 low > 103
Pseudomonas putida KT2440 0.80 PP_0871 putative Glycine betaine/carnitine/choline ABC transporter, permease protein 0.69 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 96
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS19715 ABC transporter permease 0.32 QEN71_RS22225 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 153
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS08530 glycine/betaine ABC transporter permease 0.29 HSERO_RS14825 23S rRNA methyltransferase low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1779 Putative ABC transporter membrane protein 0.35 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) low > 78
Enterobacter sp. TBS_079 0.54 MPMX20_02069 Osmoprotectant import permease protein OsmY 0.34 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 85
Pantoea sp. MT58 0.50 IAI47_09780 ABC transporter permease 0.36 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS12280 ABC transporter permease 0.35 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 74
Enterobacter asburiae PDN3 0.49 EX28DRAFT_1487 ABC-type proline/glycine betaine transport systems, permease component 0.34 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA low > 76
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS04810 glycine/betaine ABC transporter permease 0.30 RR42_RS13170 23S rRNA methyltransferase low > 128
Sinorhizobium meliloti 1021 0.45 SMa1465 ABC transporter permease 0.14 SMc00974 RNA methyltransferase low > 103
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_03486 osmoprotectant transport system permease protein 0.33 H281DRAFT_00846 23S rRNA m(5)U-1939 methyltransferase low > 103
Marinobacter adhaerens HP15 0.33 HP15_995 binding-protein-dependent transport systems inner membrane component 0.40 HP15_790 23S rRNA 5-methyluridine methyltransferase low > 73
Rhizobium sp. OAE497 0.29 ABIE40_RS02175 ABC transporter permease 0.16 ABIE40_RS03880 class I SAM-dependent RNA methyltransferase low > 107

Not shown: 1 genomes with orthologs for PS417_04025 only; 75 genomes with orthologs for PS417_20155 only