Conservation of cofitness between Psest_1163 and Psest_3718 in Pseudomonas stutzeri RCH2

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1163 diguanylate cyclase (GGDEF) domain 1.0 Psest_3718 Tfp pilus assembly protein PilN 0.47 19
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_05010 diguanylate cyclase 0.55 AO356_09410 pilus assembly protein PilN low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2852 GGDEF domain/EAL domain protein 0.55 Pf6N2E2_3759 Type IV pilus biogenesis protein PilN low > 103
Pseudomonas sp. RS175 0.71 PFR28_00605 hypothetical protein 0.59 PFR28_05008 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.71 PFLU_RS23815 GGDEF and EAL domain-containing protein 0.33 PFLU_RS02010 fimbriae biosynthesis protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS23815 GGDEF and EAL domain-containing protein 0.33 PFLU_RS02010 fimbriae biosynthesis protein low > 109
Pseudomonas putida KT2440 0.71 PP_0914 GGDEF domain protein 0.18 PP_5082 Type IV pili biogenesis protein PilN low > 96
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1777 GGDEF domain/EAL domain protein 0.57 PfGW456L13_280 Type IV pilus biogenesis protein PilN low > 87
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03970 diguanylate cyclase 0.60 AO353_12480 pilus assembly protein PilN low > 101
Pseudomonas simiae WCS417 0.70 PS417_22190 diguanylate cyclase 0.31 PS417_01965 fimbriae biosynthesis protein low > 88
Pseudomonas sp. S08-1 0.70 OH686_07220 c-di-GMP phosphodiesterase 0.80 OH686_10045 Type IV pilus biogenesis protein PilN low > 80
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_714 GGDEF domain/EAL domain protein 0.69 Pf1N1B4_1542 Type IV pilus biogenesis protein PilN low > 87
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_4060 diguanylate cyclase/phosphodiesterase 0.69 Psyr_0404 Fimbrial assembly low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_4060 diguanylate cyclase/phosphodiesterase 0.69 Psyr_0404 Fimbrial assembly low > 86
Marinobacter adhaerens HP15 0.43 HP15_2352 sensory box sensor/GGDEF/EAL domain protein 0.46 HP15_475 Tfp pilus assembly protein PilN low > 73
Shewanella amazonensis SB2B 0.29 Sama_0965 GGDEF domain-containing protein (RefSeq) 0.33 Sama_3372 type IV pilus biogenesis protein PilN (RefSeq) low > 62
Shewanella oneidensis MR-1 0.28 SO1208 GGDEF domain protein (NCBI ptt file) 0.34 SO0282 type IV pilus biogenesis protein PilN (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.27 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) 0.34 Shew_0209 fimbrial assembly family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_1034 diguanylate cyclase/phosphodiesterase (RefSeq) 0.35 Shewana3_3898 fimbrial assembly family protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_03465 GGDEF-domain containing protein 0.24 CSW01_13325 pilus assembly protein PilN low > 62

Not shown: 3 genomes with orthologs for Psest_1163 only; 12 genomes with orthologs for Psest_3718 only