Conservation of cofitness between GFF4098 and GFF3341 in Hydrogenophaga sp. GW460-11-11-14-LB1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4098 Glutamate racemase (EC 5.1.1.3) 1.0 GFF3341 Sigma factor RpoE negative regulatory protein RseB precursor 0.68 5
Acidovorax sp. GW101-3H11 0.48 Ac3H11_940 Glutamate racemase (EC 5.1.1.3) 0.44 Ac3H11_1571 Sigma factor RpoE negative regulatory protein RseB precursor
Variovorax sp. SCN45 0.44 GFF484 Glutamate racemase (EC 5.1.1.3) 0.44 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor
Variovorax sp. OAS795 0.43 ABID97_RS17555 glutamate racemase 0.44 ABID97_RS08340 MucB/RseB C-terminal domain-containing protein
Pseudomonas sp. S08-1 0.40 OH686_07895 glutamate racemase 0.14 OH686_20055 Sigma factor RpoE negative regulatory protein RseB precursor
Pseudomonas stutzeri RCH2 0.39 Psest_1116 glutamate racemase 0.15 Psest_3098 Negative regulator of sigma E activity
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS03670 glutamate racemase 0.16 PFLU_RS07240 sigma factor AlgU regulatory protein MucB
Pseudomonas fluorescens SBW25 0.39 PFLU_RS03670 glutamate racemase 0.16 PFLU_RS07240 sigma factor AlgU regulatory protein MucB
Pseudomonas simiae WCS417 0.38 PS417_03620 glutamate racemase 0.17 PS417_07130 RNA polymerase sigma-H factor AlgU
Pseudomonas sp. RS175 0.37 PFR28_03652 Glutamate racemase 2 0.15 PFR28_00692 Sigma factor AlgU regulatory protein MucB
Pseudomonas putida KT2440 0.37 PP_0736 Glutamate racemase 0.14 PP_1429 Sigma factor AlgU regulatory protein MucB
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_14800 glutamate racemase 0.16 AO353_17635 RNA polymerase subunit sigma
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2922 Glutamate racemase (EC 5.1.1.3) 0.15 Pf1N1B4_3325 Sigma factor RpoE negative regulatory protein RseB precursor
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1585 Glutamate racemase (EC 5.1.1.3) 0.15 PfGW456L13_4514 Sigma factor RpoE negative regulatory protein RseB precursor
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5224 Glutamate racemase (EC 5.1.1.3) 0.15 Pf6N2E2_2754 Sigma factor RpoE negative regulatory protein RseB precursor
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_16510 glutamate racemase 0.15 AO356_04565 RNA polymerase subunit sigma
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS14380 glutamate racemase 0.29 ABZR87_RS10175 MucB/RseB C-terminal domain-containing protein low > 80
Ralstonia solanacearum PSI07 0.33 RPSI07_RS14860 glutamate racemase 0.29 RPSI07_RS19005 sugar dehydratase low > 81
Paraburkholderia graminis OAS925 0.33 ABIE53_001660 glutamate racemase 0.28 ABIE53_003041 sigma-E factor negative regulatory protein RseB low > 113
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04958 glutamate racemase 0.28 H281DRAFT_04357 sigma E regulatory protein, MucB/RseB low > 103
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS02465 glutamate racemase 0.29 RALBFv3_RS14455 sugar dehydratase low > 76
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS23790 glutamate racemase 0.29 QEN71_RS04585 MucB/RseB C-terminal domain-containing protein
Ralstonia solanacearum UW163 0.32 UW163_RS11260 glutamate racemase 0.29 UW163_RS11920 sugar dehydratase
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_00800 glutamate racemase 0.11 CSW01_12475 sigma-E factor regulatory protein RseB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF2353 Glutamate racemase (EC 5.1.1.3) 0.10 GFF2109 Sigma factor RpoE negative regulatory protein RseB precursor
Shewanella amazonensis SB2B 0.23 Sama_0194 glutamate racemase (RefSeq) 0.09 Sama_0876 putative sigma E regulatory protein, MucB/RseB (RefSeq)

Not shown: 20 genomes with orthologs for GFF4098 only; 35 genomes with orthologs for GFF3341 only