Conservation of cofitness between PS417_20110 and PS417_01485 in Pseudomonas simiae WCS417

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20110 membrane protein 1.0 PS417_01485 ABC transporter permease 0.19 3
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS22055 AI-2E family transporter 0.91 PFLU_RS01525 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS22055 AI-2E family transporter 0.91 PFLU_RS01525 ABC transporter permease low > 109
Pseudomonas sp. RS175 0.89 PFR28_03215 Sodium-lithium/proton antiporter 0.93 PFR28_04912 Octopine transport system permease protein OccM low > 88
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_19105 hypothetical protein 0.92 AO356_09910 ABC transporter for L-Lysine, permease component 2 (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_5731 Putative permease often clustered with de novo purine synthesis 0.92 Pf6N2E2_3858 Amino acid ABC transporter, permease protein 0.21 31
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_02670 hypothetical protein 0.94 AO353_11985 ABC transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3700 Putative permease often clustered with de novo purine synthesis 0.94 Pf1N1B4_1643 Amino acid ABC transporter, permease protein low > 87
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_4250 Putative permease often clustered with de novo purine synthesis 0.94 PfGW456L13_379 Amino acid ABC transporter, permease protein low > 87
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_3687 Protein of unknown function UPF0118 0.88 Psyr_4914 amino acid ABC transporter membrane protein 2, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_3687 Protein of unknown function UPF0118 0.88 Psyr_4914 amino acid ABC transporter membrane protein 2, PAAT family low > 86
Pseudomonas putida KT2440 0.80 PP_1667 putative Transporter 0.89 PP_0280 Amino acid ABC transporter, permease protein low > 96
Pseudomonas stutzeri RCH2 0.68 Psest_1476 Predicted permease 0.79 Psest_0136 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 67
Pseudomonas sp. S08-1 0.67 OH686_19010 Putative permease often clustered with de novo purine synthesis 0.85 OH686_14490 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) low > 80
Azospirillum sp. SherDot2 0.33 MPMX19_01301 AI-2 transport protein TqsA 0.47 MPMX19_03639 Octopine transport system permease protein OccM low > 112
Rhizobium sp. OAE497 0.32 ABIE40_RS06565 AI-2E family transporter 0.44 ABIE40_RS25690 ABC transporter permease low > 107
Azospirillum brasilense Sp245 0.31 AZOBR_RS16275 membrane protein 0.47 AZOBR_RS00675 ABC transporter permease low > 97
Sinorhizobium meliloti 1021 0.31 SMc00616 permease 0.44 SMa0492 ABC transporter permease low > 103
Rhodospirillum rubrum S1H 0.29 Rru_A2164 Protein of unknown function UPF0118 (NCBI) 0.51 Rru_A2253 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) low > 58
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_04709 Predicted PurR-regulated permease PerM 0.39 H281DRAFT_05292 amino acid ABC transporter membrane protein 2, PAAT family low > 103
Paraburkholderia graminis OAS925 0.27 ABIE53_000873 putative PurR-regulated permease PerM 0.39 ABIE53_006534 octopine/nopaline transport system permease protein low > 113
Agrobacterium fabrum C58 0.27 Atu1142 permease 0.43 Atu6025 ABC transporter, membrane spanning protein (nopaline) — —
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS26450 AI-2E family transporter 0.37 QEN71_RS07735 ABC transporter permease subunit low > 153
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS03635 ABC transporter permease 0.38 BPHYT_RS24010 L-histidine ABC transporter, permease component 2 (from data) low > 109

Not shown: 33 genomes with orthologs for PS417_20110 only; 7 genomes with orthologs for PS417_01485 only