Conservation of cofitness between PS417_01425 and PS417_14100 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_01425 AraC family transcriptional regulator 1.0 PS417_14100 alpha-ketoglutarate-dependent dioxygenase 0.15 11
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_83 transcriptional regulator, AraC family 0.69 Pf6N2E2_437 Alkylated DNA repair protein AlkB low > 103
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_28535 AraC family transcriptional regulator 0.71 AO353_27010 alpha-ketoglutarate-dependent dioxygenase low > 101
Pseudomonas sp. RS175 0.88 PFR28_02003 HTH-type transcriptional activator RhaR 0.69 PFR28_02492 Alpha-ketoglutarate-dependent dioxygenase AlkB low > 88
Pseudomonas fluorescens SBW25 0.87 PFLU_RS18330 AraC family transcriptional regulator 0.94 PFLU_RS14510 DNA oxidative demethylase AlkB low > 109
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS18330 AraC family transcriptional regulator 0.94 PFLU_RS14510 DNA oxidative demethylase AlkB low > 109
Pseudomonas putida KT2440 0.74 PP_2173 Transcriptional regulator, AraC family 0.53 PP_3400 alpha-ketoglutarate- and Fe(II)-dependent dioxygenase low > 96
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS19895 AraC family transcriptional regulator 0.47 HSERO_RS08355 dioxygenase low > 78
Dechlorosoma suillum PS 0.49 Dsui_2034 DNA gyrase inhibitor 0.50 Dsui_3098 alkylated DNA repair protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3136 Uncharacterized protein ygiV 0.51 GFF1826 Alkylated DNA repair protein AlkB low > 78
Pectobacterium carotovorum WPP14 0.46 HER17_RS19395 AraC family transcriptional regulator 0.51 HER17_RS17090 DNA oxidative demethylase AlkB low > 75
Rahnella sp. WP5 0.45 EX31_RS13520 AraC family transcriptional regulator 0.56 EX31_RS03140 DNA oxidative demethylase AlkB low > 89
Ralstonia solanacearum PSI07 0.42 RPSI07_RS23330 AraC family transcriptional regulator 0.58 RPSI07_RS12045 DNA oxidative demethylase AlkB low > 81
Ralstonia solanacearum GMI1000 0.42 RS_RS00650 AraC family transcriptional regulator 0.55 RS_RS12875 DNA oxidative demethylase AlkB low > 80
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS05545 AraC family transcriptional regulator 0.59 ABZR87_RS00890 DNA oxidative demethylase AlkB low > 80
Ralstonia solanacearum UW163 0.40 UW163_RS03540 AraC family transcriptional regulator 0.54 UW163_RS08370 DNA oxidative demethylase AlkB — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS10040 AraC family transcriptional regulator 0.54 RALBFv3_RS05255 DNA oxidative demethylase AlkB low > 76
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_23800 AraC family transcriptional regulator 0.67 AO356_22760 alpha-ketoglutarate-dependent dioxygenase low > 104
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS22525 AraC family transcriptional regulator 0.47 RR42_RS23540 alpha-ketoglutarate-dependent dioxygenase low > 128
Variovorax sp. SCN45 0.23 GFF3429 Transcriptional regulator, AraC family 0.58 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) low > 127
Rhizobium sp. OAE497 0.17 ABIE40_RS10300 AraC family transcriptional regulator 0.31 ABIE40_RS19425 alpha-ketoglutarate-dependent dioxygenase AlkB low > 107
Rhodopseudomonas palustris CGA009 0.15 TX73_004525 AraC family transcriptional regulator 0.58 TX73_008860 DNA oxidative demethylase AlkB low > 86
Klebsiella michiganensis M5al 0.13 BWI76_RS04205 right oriC-binding transcriptional activator 0.49 BWI76_RS19890 alpha-ketoglutarate-dependent dioxygenase AlkB low > 92
Serratia liquefaciens MT49 0.13 IAI46_03005 MDR efflux pump AcrAB transcriptional activator RobA 0.51 IAI46_16945 DNA oxidative demethylase AlkB low > 86
Dickeya dianthicola 67-19 0.12 HGI48_RS18365 MDR efflux pump AcrAB transcriptional activator RobA 0.49 HGI48_RS04520 DNA oxidative demethylase AlkB low > 71
Dickeya dianthicola ME23 0.12 DZA65_RS19505 MDR efflux pump AcrAB transcriptional activator RobA 0.49 DZA65_RS04440 DNA oxidative demethylase AlkB 0.40 46
Dickeya dadantii 3937 0.12 DDA3937_RS18435 MDR efflux pump AcrAB transcriptional activator RobA 0.49 DDA3937_RS04560 DNA oxidative demethylase AlkB low > 74
Enterobacter asburiae PDN3 0.12 EX28DRAFT_3606 AraC-type DNA-binding domain-containing proteins 0.49 EX28DRAFT_0364 Alkylated DNA repair protein low > 76

Not shown: 16 genomes with orthologs for PS417_01425 only; 30 genomes with orthologs for PS417_14100 only