Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Marinobacter adhaerens HP15 | 1.0 | HP15_3056 | | high-affinity branched-chain amino acid ABC transporter, permease protein | 1.0 | HP15_2698 | | phenylacetate-CoA oxygenase, PaaH subunit | 0.37 | 17 |
Serratia liquefaciens MT49 | 0.66 | IAI46_00965 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.68 | IAI46_16355 | | 1,2-phenylacetyl-CoA epoxidase subunit B | 0.52 | 4 |
Cupriavidus basilensis FW507-4G11 | 0.64 | RR42_RS14420 | | branched-chain amino acid transporter permease subunit LivH | 0.65 | RR42_RS23730 | | phenylacetate-CoA oxygenase subunit PaaB | low | > 128 |
Klebsiella michiganensis M5al | 0.63 | BWI76_RS26345 | | branched-chain amino acid ABC transporter permease LivH | 0.66 | BWI76_RS13095 | | phenylacetate-CoA oxygenase subunit PaaB | low | > 92 |
Pseudomonas fluorescens GW456-L13 | 0.63 | PfGW456L13_4608 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.84 | PfGW456L13_2426 | | Phenylacetate-CoA oxygenase, PaaH subunit | low | > 87 |
Enterobacter sp. TBS_079 | 0.63 | MPMX20_04333 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.66 | MPMX20_02143 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | low | > 85 |
Pseudomonas putida KT2440 | 0.63 | PP_1140 | | branched chain amino acid transporter - permease subunit | 0.84 | PP_3277 | | ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit | low | > 96 |
Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_4289 | | Branched-chain amino acid ABC-type transport system, permease components | 0.66 | EX28DRAFT_1419 | | phenylacetate-CoA oxygenase, PaaH subunit | low | > 76 |
Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS08275 | | branched-chain amino acid transporter permease subunit LivH | 0.63 | HSERO_RS20615 | | phenylacetate-CoA oxygenase subunit PaaB | low | > 78 |
Escherichia coli BW25113 | 0.62 | b3457 | livH | leucine/isoleucine/valine transporter subunit (NCBI) | 0.66 | b1389 | paaB | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | — | — |
Escherichia coli ECOR27 | 0.62 | NOLOHH_08540 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.66 | NOLOHH_19485 | paaB | 1,2-phenylacetyl-CoA epoxidase subunit B | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_00246 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.66 | OHPLBJKB_02322 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | low | > 73 |
Escherichia coli ECRC62 | 0.62 | BNILDI_02965 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.66 | BNILDI_17940 | paaB | 1,2-phenylacetyl-CoA epoxidase subunit B | — | — |
Azospirillum sp. SherDot2 | 0.58 | MPMX19_06002 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.67 | MPMX19_05771 | | 1,2-phenylacetyl-CoA epoxidase, subunit B | — | — |
Variovorax sp. OAS795 | 0.55 | ABID97_RS27580 | | branched-chain amino acid ABC transporter permease LivH | 0.67 | ABID97_RS22790 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaB | low | > 91 |
Rhodopseudomonas palustris CGA009 | 0.53 | TX73_019710 | | branched-chain amino acid ABC transporter permease | 0.70 | TX73_019505 | | 1,2-phenylacetyl-CoA epoxidase subunit B | low | > 86 |
Sinorhizobium meliloti 1021 | 0.52 | SMc01951 | | high-affinity branched-chain amino acid ABC transporter permease | 0.72 | SM_b21639 | | phenylacetate-CoA oxygenase subunit PaaB | low | > 103 |
Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS03105 | | branched-chain amino acid ABC transporter permease | 0.74 | QEN71_RS28400 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaB | low | > 153 |
Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS31740 | | ABC transporter permease | 0.73 | BPHYT_RS18255 | | phenylacetate-CoA oxygenase subunit PaaB | low | > 109 |
Paraburkholderia graminis OAS925 | 0.39 | ABIE53_003285 | | branched-chain amino acid transport system permease protein | 0.74 | ABIE53_000004 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB | low | > 113 |
Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_04062 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | 0.75 | H281DRAFT_05857 | | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB | low | > 103 |
Ralstonia solanacearum GMI1000 | 0.39 | RS_RS12250 | | branched-chain amino acid ABC transporter permease | 0.73 | RS_RS20010 | | 1,2-phenylacetyl-CoA epoxidase subunit B | low | > 80 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF778 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.70 | GFF1686 | | Phenylacetate-CoA oxygenase, PaaH subunit | — | — |
Ralstonia solanacearum UW163 | 0.39 | UW163_RS08980 | | branched-chain amino acid ABC transporter permease | 0.73 | UW163_RS18520 | | 1,2-phenylacetyl-CoA epoxidase subunit B | — | — |
Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS04690 | | branched-chain amino acid ABC transporter permease | 0.73 | RALBFv3_RS20655 | | 1,2-phenylacetyl-CoA epoxidase subunit B | low | > 76 |
Variovorax sp. SCN45 | 0.39 | GFF6033 | | Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) | 0.67 | GFF6094 | | 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) | low | > 127 |
Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS12695 | | branched-chain amino acid ABC transporter permease | 0.73 | RPSI07_RS02135 | | 1,2-phenylacetyl-CoA epoxidase subunit B | low | > 81 |
Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS00310 | | branched-chain amino acid ABC transporter permease | 0.73 | ABZR87_RS21255 | | 1,2-phenylacetyl-CoA epoxidase subunit PaaB | low | > 80 |
Not shown: 43 genomes with orthologs for HP15_3056 only; 3 genomes with orthologs for HP15_2698 only