| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF1652 | | tRNA (5-methoxyuridine) 34 synthase | 1.0 | GFF2595 | | Transcriptional regulator yidN, Cro/CI family | 0.38 | 18 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_01857 | | tRNA U34 carboxymethyltransferase | 0.77 | OHPLBJKB_02281 | | HTH-type transcriptional regulator SutR | low | > 73 |
| Escherichia coli ECRC62 | 0.94 | BNILDI_15455 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | BNILDI_17730 | sutR | DNA-binding transcriptional regulator SutR | 0.46 | 74 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_04630 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.76 | HEPCGN_26215 | sutR | DNA-binding transcriptional regulator SutR | low | > 87 |
| Escherichia coli BL21 | 0.94 | ECD_01842 | | tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent | 0.77 | ECD_01392 | | putative DNA-binding transcriptional regulator | — | — |
| Escherichia coli ECRC101 | 0.94 | MCAODC_19185 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | MCAODC_16335 | sutR | DNA-binding transcriptional regulator SutR | low | > 87 |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_01885 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | KEDOAH_26835 | sutR | DNA-binding transcriptional regulator SutR | — | — |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_00795 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | JDDGAC_04095 | sutR | DNA-binding transcriptional regulator SutR | low | > 86 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_01840 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | NIAGMN_25740 | sutR | DNA-binding transcriptional regulator SutR | — | — |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_16665 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | NOLOHH_19280 | sutR | DNA-binding transcriptional regulator SutR | low | > 75 |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_26220 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | OKFHMN_01605 | sutR | DNA-binding transcriptional regulator SutR | low | > 80 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS10700 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.77 | ECOLIN_RS08275 | | DNA-binding transcriptional regulator SutR | — | — |
| Escherichia fergusonii Becca | 0.94 | EFB2_02071 | | tRNA U34 carboxymethyltransferase | 0.76 | EFB2_02548 | | HTH-type transcriptional regulator SutR | low | > 86 |
| Escherichia coli BW25113 | 0.94 | b1871 | yecP | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | 0.77 | b1434 | ydcN | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_02776 | | tRNA U34 carboxymethyltransferase | 0.69 | MPMX20_02243 | | HTH-type transcriptional regulator SutR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_0686 | | tRNA (mo5U34)-methyltransferase | 0.71 | EX28DRAFT_1223 | | Cupin domain/Helix-turn-helix | low | > 76 |
| Klebsiella michiganensis M5al | 0.88 | BWI76_RS18195 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.71 | BWI76_RS13370 | | hypothetical protein | low | > 92 |
| Serratia liquefaciens MT49 | 0.82 | IAI46_14675 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.55 | IAI46_11440 | | helix-turn-helix transcriptional regulator | low | > 86 |
| Dickeya dadantii 3937 | 0.80 | DDA3937_RS10035 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.21 | DDA3937_RS01955 | | helix-turn-helix domain-containing protein | low | > 74 |
| Rahnella sp. WP5 | 0.78 | EX31_RS17290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.54 | EX31_RS05710 | | helix-turn-helix transcriptional regulator | 0.34 | 40 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS11890 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.50 | HER17_RS21700 | | XRE family transcriptional regulator | low | > 75 |
| Pantoea sp. MT58 | 0.74 | IAI47_08405 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.46 | IAI47_10265 | | helix-turn-helix domain-containing protein | low | > 76 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_05895 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.34 | CSW01_09830 | | XRE family transcriptional regulator | low | > 62 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_1950 | | putative methyltransferase (RefSeq) | 0.47 | Shewana3_0319 | | XRE family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.64 | SO2436 | | methyltransferase, putative (NCBI ptt file) | 0.16 | SO1265 | | transcriptional regulator, putative (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.62 | Sama_1846 | | methyltransferase, putative (RefSeq) | 0.15 | Sama_2646 | | XRE family transcriptional regulator (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_02226 | | tRNA (mo5U34)-methyltransferase | 0.35 | MIT1002_00748 | | DNA-binding transcriptional repressor PuuR | low | > 70 |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_06450 | | tRNA (mo5U34)-methyltransferase | 0.25 | AO356_23675 | | hydroxyacid dehydrogenase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_826 | | tRNA (5-methoxyuridine) 34 synthase | 0.25 | Pf1N1B4_4417 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.24 | PFLU_RS18295 | | helix-turn-helix domain-containing protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.24 | PFLU_RS18295 | | helix-turn-helix domain-containing protein | low | > 109 |
| Pseudomonas stutzeri RCH2 | 0.51 | Psest_3085 | | methyltransferase, putative | 0.15 | Psest_3791 | | Predicted transcriptional regulators | low | > 67 |