Conservation of cofitness between GFF4333 and GFF2564 in Hydrogenophaga sp. GW460-11-11-14-LB1

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 1.0 GFF2564 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.61 8
Acidovorax sp. GW101-3H11 0.88 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.75 Ac3H11_1197 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
Variovorax sp. SCN45 0.87 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.71 GFF5482 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system low > 127
Variovorax sp. OAS795 0.86 ABID97_RS16535 arginine/lysine/ornithine decarboxylase 0.71 ABID97_RS01865 Lrp/AsnC family transcriptional regulator low > 91
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS04325 lysine decarboxylase 0.37 RALBFv3_RS16050 Lrp/AsnC family transcriptional regulator
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS15940 lysine decarboxylase 0.38 RR42_RS22825 AsnC family transcriptional regulator
Paraburkholderia graminis OAS925 0.73 ABIE53_001270 arginine decarboxylase 0.37 ABIE53_005396 Lrp/AsnC family leucine-responsive transcriptional regulator
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_00160 ornithine decarboxylase 0.37 H281DRAFT_03466 transcriptional regulator, AsnC family
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS25000 arginine/lysine/ornithine decarboxylase 0.38 QEN71_RS21180 Lrp/AsnC family transcriptional regulator
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS04980 lysine decarboxylase 0.37 BPHYT_RS23670 AsnC family transcriptional regulator
Rhizobium sp. OAE497 0.46 ABIE40_RS23760 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.38 ABIE40_RS05800 Lrp/AsnC family transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.46 SMa0682 decarboxylase (lysine, ornithine, arginine) 0.34 SMc03210 transcriptional regulator low > 103
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.40 Pf1N1B4_1975 Transcriptional regulator, AsnC family low > 87
Pseudomonas sp. S08-1 0.45 OH686_03560 Lysine decarboxylase, inducible 0.43 OH686_05175 Transcriptional regulator, AsnC family low > 80
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_23560 lysine decarboxylase 0.43 AO353_21075 AsnC family transcriptional regulator low > 101
Pseudomonas simiae WCS417 0.45 PS417_12240 lysine decarboxylase 0.41 PS417_11740 AsnC family transcriptional regulator
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.40 PfGW456L13_697 Transcriptional regulator, AsnC family low > 87
Pseudomonas fluorescens SBW25 0.45 PFLU_RS12930 lysine decarboxylase 0.41 PFLU_RS12515 Lrp/AsnC family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS12930 lysine decarboxylase 0.41 PFLU_RS12515 Lrp/AsnC family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.42 PP_4140 lysine decarboxylase 0.40 PP_1307 AsnC family transcriptional regulator low > 96
Rahnella sp. WP5 0.32 EX31_RS12950 lysine decarboxylase LdcC 0.45 EX31_RS13415 Lrp/AsnC family transcriptional regulator low > 89
Pantoea sp. MT58 0.32 IAI47_15445 lysine decarboxylase LdcC 0.40 IAI47_20840 Lrp/AsnC family transcriptional regulator low > 76
Rhodopseudomonas palustris CGA009 0.29 TX73_010575 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.36 TX73_001935 Lrp/AsnC family transcriptional regulator low > 86
Magnetospirillum magneticum AMB-1 0.29 AMB_RS05630 amino acid decarboxylase 0.34 AMB_RS03420 Lrp/AsnC family transcriptional regulator
Azospirillum sp. SherDot2 0.29 MPMX19_05197 Inducible ornithine decarboxylase 0.41 MPMX19_05505 Leucine-responsive regulatory protein low > 112
Dickeya dadantii 3937 0.20 DDA3937_RS04870 ornithine decarboxylase 0.40 DDA3937_RS02090 Lrp/AsnC family transcriptional regulator low > 74
Alteromonas macleodii MIT1002 0.15 MIT1002_02902 Arginine decarboxylase 0.35 MIT1002_00635 Leucine-responsive regulatory protein low > 70

Not shown: 36 genomes with orthologs for GFF4333 only; 12 genomes with orthologs for GFF2564 only