Conservation of cofitness between PS417_24580 and PS417_12325 in Pseudomonas simiae WCS417

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_24580 pseudouridine synthase 1.0 PS417_12325 precorrin-4 C11-methyltransferase 0.20 15
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS26510 pseudouridine synthase 0.96 PFLU_RS13015 precorrin-4 C(11)-methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.95 PFLU_RS26510 pseudouridine synthase 0.96 PFLU_RS13015 precorrin-4 C(11)-methyltransferase low > 109
Pseudomonas sp. RS175 0.88 PFR28_03839 Ribosomal large subunit pseudouridine synthase E 0.84 PFR28_01372 Precorrin-4 C(11)-methyltransferase low > 88
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_4336 ribosomal large subunit pseudouridine synthase E 0.83 Psyr_3020 precorrin-4 C11-methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_4336 ribosomal large subunit pseudouridine synthase E 0.83 Psyr_3020 precorrin-4 C11-methyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.85 Pf1N1B4_5658 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) low > 87
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_15455 pseudouridine synthase 0.84 AO356_00530 precorrin-4 C11-methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_06330 pseudouridine synthase 0.85 AO353_21630 precorrin-4 C11-methyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.83 PfGW456L13_2850 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) low > 87
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.87 Pf6N2E2_2065 Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) low > 103
Pseudomonas putida KT2440 0.82 PP_4778 23S rRNA pseudouridine 2457 synthase 0.76 PP_3410 Precorrin-4 C(11)-methyltransferase — —
Pseudomonas sp. S08-1 0.76 OH686_08840 LSU rRNA pseudouridine(2457) synthase 0.69 OH686_05035 precorrin-4 C11-methyltransferase low > 80
Magnetospirillum magneticum AMB-1 0.60 AMB_RS12420 pseudouridine synthase 0.54 AMB_RS02645 precorrin-4 C(11)-methyltransferase — —
Azospirillum sp. SherDot2 0.57 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E 0.48 MPMX19_05565 Precorrin-4 C(11)-methyltransferase — —
Klebsiella michiganensis M5al 0.56 BWI76_RS11325 23S rRNA pseudouridine synthase E 0.42 BWI76_RS23060 cobalt-precorrin-4 C(11)-methyltransferase — —
Dinoroseobacter shibae DFL-12 0.52 Dshi_2908 pseudouridine synthase (RefSeq) 0.50 Dshi_0176 precorrin-4 C11-methyltransferase (RefSeq) — —
Rhodospirillum rubrum S1H 0.50 Rru_A1939 Pseudouridine synthase, Rsu (NCBI) 0.53 Rru_A3384 Precorrin-4 C11-methyltransferase region (NCBI) low > 58
Synechococcus elongatus PCC 7942 0.48 Synpcc7942_1514 Pseudouridine synthase, Rsu 0.40 Synpcc7942_1229 cobM precorrin-4 C11-methyltransferase — —
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS02975 pseudouridine synthase 0.64 QEN71_RS08780 precorrin-4 C(11)-methyltransferase low > 153
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07010 pseudouridine synthase 0.41 HSERO_RS13280 precorrin-4 C11-methyltransferase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04086 23S rRNA pseudouridine2457 synthase 0.67 H281DRAFT_02858 precorrin-4 C11-methyltransferase /precorrin-2 C20-methyltransferase — —
Paraburkholderia graminis OAS925 0.47 ABIE53_003318 23S rRNA pseudouridine2457 synthase 0.66 ABIE53_005936 precorrin-4/cobalt-precorrin-4 C11-methyltransferase low > 113

Not shown: 38 genomes with orthologs for PS417_24580 only; 20 genomes with orthologs for PS417_12325 only