Conservation of cofitness between GFF72 and GFF239 in Variovorax sp. SCN45

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) 1.0 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) 0.55 15
Variovorax sp. OAS795 0.76 ABID97_RS21530 DSD1 family PLP-dependent enzyme 0.84 ABID97_RS16575 DNA polymerase III subunit chi — —
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS33450 alanine racemase 0.42 RR42_RS16220 DNA polymerase III subunit chi low > 128
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS14275 DSD1 family PLP-dependent enzyme 0.34 QEN71_RS25200 DNA polymerase III subunit chi — —
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS05720 alanine racemase 0.42 HSERO_RS07285 DNA polymerase III subunit chi — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS05660 alanine racemase 0.36 RALBFv3_RS04545 DNA polymerase III subunit chi low > 76
Ralstonia solanacearum UW163 0.72 UW163_RS07965 alanine racemase 0.36 UW163_RS09125 DNA polymerase III subunit chi — —
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS28865 alanine racemase 0.39 BPHYT_RS04800 DNA polymerase III subunit chi — —
Ralstonia solanacearum GMI1000 0.71 RS_RS13550 DSD1 family PLP-dependent enzyme 0.35 RS_RS12115 DNA polymerase III subunit chi low > 80
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_03260 D-serine deaminase, pyridoxal phosphate-dependent 0.39 H281DRAFT_00124 DNA polymerase III, chi subunit — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS05880 DSD1 family PLP-dependent enzyme 0.35 ABZR87_RS00145 DNA polymerase III subunit chi — —
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_26790 alanine racemase 0.23 AO356_17465 DNA polymerase III subunit chi low > 104
Paraburkholderia graminis OAS925 0.67 ABIE53_002131 D-serine deaminase-like pyridoxal phosphate-dependent protein 0.38 ABIE53_001236 DNA polymerase-3 subunit chi — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_3398 Alanine racemase, N-terminal 0.20 Psyr_1090 DNA polymerase III, chi subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_3398 Alanine racemase, N-terminal 0.20 Psyr_1090 DNA polymerase III, chi subunit low > 86
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_354 Type III PLP / low-specificity D-threonine aldolase 0.23 Pf6N2E2_5419 DNA polymerase III chi subunit (EC 2.7.7.7) low > 103
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS19810 DSD1 family PLP-dependent enzyme 0.21 PFLU_RS05230 DNA polymerase III subunit chi low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS19810 DSD1 family PLP-dependent enzyme 0.21 PFLU_RS05230 DNA polymerase III subunit chi low > 109
Pseudomonas simiae WCS417 0.65 PS417_12910 alanine racemase 0.21 PS417_05160 DNA polymerase III subunit chi low > 88
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_4210 Type III PLP / low-specificity D-threonine aldolase 0.21 Pf1N1B4_899 DNA polymerase III chi subunit (EC 2.7.7.7) low > 87

Not shown: 6 genomes with orthologs for GFF72 only; 16 genomes with orthologs for GFF239 only