Conservation of cofitness between HP15_861 and HP15_2309 in Marinobacter adhaerens HP15

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_861 cold shock, CspA 1.0 HP15_2309 flagellar biosynthesis protein FlhB 0.74 8
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_14910 cold-shock protein 0.46 CSW01_10580 flagellar biosynthesis protein FlhB low > 62
Shewanella oneidensis MR-1 0.67 SO2787 cold shock domain family protein (NCBI ptt file) 0.51 SO3215 flhB flagellar biosynthetic protein FlhB (NCBI ptt file) — —
Shewanella sp. ANA-3 0.67 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) 0.51 Shewana3_1355 flhB flagellar biosynthesis protein FlhB (RefSeq) — —
Shewanella loihica PV-4 0.67 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) 0.50 Shew_1379 flhB flagellar biosynthesis protein FlhB (RefSeq) — —
Enterobacter sp. TBS_079 0.65 MPMX20_01283 Cold shock-like protein CspE 0.38 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2340 Cold shock proteins 0.38 EX28DRAFT_0680 flagellar biosynthetic protein FlhB — —
Shewanella amazonensis SB2B 0.65 Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) 0.46 Sama_2284 flhB flagellar biosynthesis protein FlhB (RefSeq) — —
Escherichia coli ECRC101 0.65 OKFHMN_07420 cspE transcription antiterminator/RNA stability regulator CspE 0.34 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_03082 Cold shock-like protein CspE 0.34 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB low > 73
Escherichia coli ECRC98 0.65 JDDGAC_11065 cspE transcription antiterminator/RNA stability regulator CspE 0.34 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC101 0.65 MCAODC_26635 cspE transcription antiterminator/RNA stability regulator CspE 0.34 MCAODC_19240 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC62 0.65 BNILDI_21805 cspE transcription antiterminator/RNA stability regulator CspE 0.34 BNILDI_15395 flhB flagellar biosynthesis protein FlhB — —
Pantoea sp. MT58 0.65 IAI47_14075 transcription antiterminator/RNA stability regulator CspE 0.32 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Escherichia coli ECRC102 0.65 NIAGMN_05475 cspE transcription antiterminator/RNA stability regulator CspE 0.34 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECRC99 0.65 KEDOAH_20550 cspE transcription antiterminator/RNA stability regulator CspE 0.34 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli ECOR27 0.65 NOLOHH_23795 cspE transcription antiterminator/RNA stability regulator CspE 0.34 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB — —
Escherichia coli BW25113 0.65 b0623 cspE cold shock protein E (NCBI) 0.34 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Escherichia coli ECOR38 0.65 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE 0.34 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 85
Escherichia coli BL21 0.65 ECD_00593 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein 0.34 ECD_01851 flagellin export apparatus, substrate specificity protein low > 60
Escherichia fergusonii Becca 0.65 EFB2_03468 Cold shock-like protein CspE 0.35 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Escherichia coli Nissle 1917 0.65 ECOLIN_RS03400 transcription antiterminator/RNA stability regulator CspE 0.35 ECOLIN_RS10740 flagellar biosynthesis protein FlhB low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF4536 Cold shock protein CspE 0.38 GFF1661 Flagellar biosynthesis protein FlhB — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_16395 cold-shock protein 0.47 AO353_18760 flagellar biosynthetic protein FlhB — —
Dickeya dianthicola 67-19 0.63 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE 0.40 HGI48_RS13555 flagellar type III secretion system protein FlhB — —
Dickeya dianthicola ME23 0.63 DZA65_RS06510 transcription antiterminator/RNA stability regulator CspE 0.40 DZA65_RS14040 flagellar type III secretion system protein FlhB low > 75
Dickeya dadantii 3937 0.63 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE 0.40 DDA3937_RS13510 flagellar type III secretion system protein FlhB — —
Erwinia tracheiphila SCR3 0.63 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE 0.33 LU632_RS13510 flhB flagellar type III secretion system protein FlhB — —
Pseudomonas fluorescens SBW25 0.63 PFLU_RS06205 cold-shock protein 0.48 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS06205 cold-shock protein 0.48 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas simiae WCS417 0.63 PS417_06140 cold-shock protein 0.49 PS417_19725 flagellar biosynthesis protein FlhB low > 88
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4724 Cold shock protein CspA 0.53 PfGW456L13_4336 Flagellar biosynthesis protein FlhB — —
Rahnella sp. WP5 0.62 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE 0.31 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Pectobacterium carotovorum WPP14 0.62 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE 0.38 HER17_RS08135 flagellar type III secretion system protein FlhB low > 75
Serratia liquefaciens MT49 0.62 IAI46_05870 transcription antiterminator/RNA stability regulator CspE 0.36 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_3068 Cold shock protein CspA 0.53 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB — —

Not shown: 2 genomes with orthologs for HP15_861 only; 29 genomes with orthologs for HP15_2309 only