Conservation of cofitness between PGA1_c36240 and PGA1_c21820 in Phaeobacter inhibens DSM 17395

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c36240 ribosomal RNA large subunit methyltransferase N 1.0 PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein 0.29 14
Dinoroseobacter shibae DFL-12 0.83 Dshi_3311 radical SAM enzyme, Cfr family (RefSeq) 0.42 Dshi_2769 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.58 SMc03831 hypothetical protein 0.23 SMc03974 hypothetical protein low > 103
Rhizobium sp. OAE497 0.57 ABIE40_RS18200 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.29 ABIE40_RS15645 5-formyltetrahydrofolate cyclo-ligase low > 107
Agrobacterium fabrum C58 0.57 Atu2673 hypothetical protein 0.27 Atu3731 5-formyltetrahydrofolate cyclo-ligase low > 89
Rhodopseudomonas palustris CGA009 0.56 TX73_002060 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.31 TX73_023120 5-formyltetrahydrofolate cyclo-ligase low > 86
Azospirillum sp. SherDot2 0.55 MPMX19_02413 Dual-specificity RNA methyltransferase RlmN 0.21 MPMX19_00693 5-formyltetrahydrofolate cyclo-ligase low > 112
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_1407 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.23 Ga0059261_0735 5,10-methenyltetrahydrofolate synthetase low > 68
Magnetospirillum magneticum AMB-1 0.51 AMB_RS05715 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.32 AMB_RS16280 5-formyltetrahydrofolate cyclo-ligase low > 64
Pectobacterium carotovorum WPP14 0.42 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.21 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase low > 75
Shewanella amazonensis SB2B 0.42 Sama_2368 hypothetical protein (RefSeq) 0.20 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) low > 62
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.18 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase low > 76
Shewanella loihica PV-4 0.41 Shew_1287 hypothetical protein (RefSeq) 0.19 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) low > 60
Escherichia coli BL21 0.41 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent 0.19 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein low > 60
Escherichia coli BW25113 0.41 b2517 yfgB predicted enzyme (NCBI) 0.19 b2912 ygfA putative ligase (VIMSS) low > 76
Escherichia coli ECOR27 0.41 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 57
Escherichia coli ECRC62 0.41 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECOR38 0.41 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.19 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 85
Escherichia fergusonii Becca 0.41 EFB2_01373 Dual-specificity RNA methyltransferase RlmN 0.20 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.19 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase low > 52
Escherichia coli ECRC102 0.41 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC98 0.41 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.41 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN 0.19 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.63 30
Escherichia coli ECRC101 0.41 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC99 0.41 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Rahnella sp. WP5 0.41 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.19 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase low > 89
Erwinia tracheiphila SCR3 0.41 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase — —
Marinobacter adhaerens HP15 0.41 HP15_1490 conserved hypothetical protein 0.15 HP15_3211 5-formyltetrahydrofolate cyclo-ligase low > 73
Serratia liquefaciens MT49 0.40 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.19 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase low > 86
Pantoea sp. MT58 0.40 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.19 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase low > 76
Dickeya dadantii 3937 0.40 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase low > 74
Dickeya dianthicola ME23 0.39 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase low > 75
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS12590 dual-specificity RNA methyltransferase RlmN 0.18 BPHYT_RS18615 5-formyltetrahydrofolate cyclo-ligase low > 109
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.20 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase low > 62
Variovorax sp. OAS795 0.36 ABID97_RS14210 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.17 ABID97_RS06600 5-formyltetrahydrofolate cyclo-ligase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF4866 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.18 GFF1613 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 90

Not shown: 64 genomes with orthologs for PGA1_c36240 only; 0 genomes with orthologs for PGA1_c21820 only