Conservation of cofitness between PGA1_c29260 and PGA1_c19170 in Phaeobacter inhibens DSM 17395

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c29260 ribosomal RNA small subunit methyltransferase D 1.0 PGA1_c19170 sarcosine oxidase subunit beta 0.27 11
Dinoroseobacter shibae DFL-12 0.51 Dshi_0115 putative methyltransferase (RefSeq) 0.52 Dshi_2117 sarcosine oxidase, beta subunit family (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.46 SMc00902 hypothetical protein 0.54 SMc03933 sarcosine oxidase subunit B protein — —
Agrobacterium fabrum C58 0.44 Atu0690 hypothetical protein 0.53 Atu4066 sarcosine oxidase beta subunit low > 89
Rhizobium sp. OAE497 0.43 ABIE40_RS03765 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.54 ABIE40_RS16535 sarcosine oxidase subunit beta family protein 0.48 84
Azospirillum sp. SherDot2 0.36 MPMX19_01626 Ribosomal RNA small subunit methyltransferase D 0.54 MPMX19_04708 Sarcosine oxidase subunit beta — —
Pseudomonas putida KT2440 0.31 PP_5114 putative adenine methyltransferase 0.54 PP_0323 sarcosine oxidase subunit beta low > 96
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 0.54 Psyr_4713 Sarcosine oxidase, beta subunit, heterotetrameric low > 86
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.56 PfGW456L13_1117 Sarcosine oxidase beta subunit (EC 1.5.3.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.56 AO356_13975 sarcosine oxidase subunit beta low > 104
Pseudomonas sp. RS175 0.27 PFR28_04262 Ribosomal RNA small subunit methyltransferase D 0.55 PFR28_04134 Sarcosine oxidase subunit beta low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 0.54 Psyr_4713 Sarcosine oxidase, beta subunit, heterotetrameric low > 86
Pseudomonas simiae WCS417 0.27 PS417_26825 16S rRNA methyltransferase 0.56 PS417_26190 sarcosine oxidase subunit beta — —
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.56 Pf6N2E2_4718 Sarcosine oxidase beta subunit (EC 1.5.3.1) low > 103
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.56 PFLU_RS27820 sarcosine oxidase subunit beta low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.56 PFLU_RS27820 sarcosine oxidase subunit beta low > 109
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.56 Pf1N1B4_2455 Sarcosine oxidase beta subunit (EC 1.5.3.1) — —
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.56 AO353_07660 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming), beta subunit (EC 1.5.3.24) (from data) low > 101
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS02815 methyltransferase 0.56 BPHYT_RS25105 sarcosine oxidase subunit beta low > 109
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_01968 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.55 H281DRAFT_02456 sarcosine oxidase subunit beta low > 103
Ralstonia solanacearum GMI1000 0.22 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.56 RS_RS17415 sarcosine oxidase subunit beta family protein low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS01665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.56 QEN71_RS08040 sarcosine oxidase subunit beta family protein low > 153
Ralstonia solanacearum PSI07 0.21 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.10 RPSI07_RS04680 FAD-binding oxidoreductase low > 81
Paraburkholderia graminis OAS925 0.21 ABIE53_000701 16S rRNA (guanine966-N2)-methyltransferase 0.56 ABIE53_006159 sarcosine oxidase subunit beta low > 113

Not shown: 65 genomes with orthologs for PGA1_c29260 only; 1 genomes with orthologs for PGA1_c19170 only