Conservation of cofitness between PS417_22115 and PS417_07640 in Pseudomonas simiae WCS417

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22115 transcriptional regulator 1.0 PS417_07640 glyceraldehyde-3-phosphate dehydrogenase 0.38 1
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 1.00 PFLU_RS07715 glyceraldehyde-3-phosphate dehydrogenase
Pseudomonas fluorescens SBW25 1.00 PFLU_RS23730 MurR/RpiR family transcriptional regulator 1.00 PFLU_RS07715 glyceraldehyde-3-phosphate dehydrogenase
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family 0.90 PfGW456L13_4026 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) 0.41 2
Pseudomonas sp. RS175 0.96 PFR28_00572 HTH-type transcriptional regulator HexR 0.94 PFR28_01124 Glyceraldehyde-3-phosphate dehydrogenase-like protein
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family 0.90 Pf6N2E2_2277 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) 0.41 4
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05165 transcriptional regulator 0.96 AO356_02265 glyceraldehyde-3-phosphate dehydrogenase 0.40 22
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_03365 transcriptional regulator 0.96 AO353_00430 glyceraldehyde-3-phosphate dehydrogenase 0.42 6
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family 0.92 Pf1N1B4_3917 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) 0.53 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.92 Psyr_1897 Glyceraldehyde-3-phosphate dehydrogenase, type I
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.92 Psyr_1897 Glyceraldehyde-3-phosphate dehydrogenase, type I
Pseudomonas putida KT2440 0.88 PP_1021 DNA-binding transcriptional regulator 0.90 PP_2149 glyceraldehyde-3-phosphate dehydrogenase
Pseudomonas stutzeri RCH2 0.88 Psest_0851 Transcriptional regulators 0.85 Psest_1654 glyceraldehyde-3-phosphate dehydrogenase, type I
Pseudomonas sp. S08-1 0.87 OH686_02440 Phosphogluconate repressor HexR, RpiR family 0.82 OH686_21995 glyceraldehyde-3-phosphate dehydrogenase, type I
Marinobacter adhaerens HP15 0.61 HP15_2180 transcriptional regulator, RpiR family protein 0.68 HP15_2255 glyceraldehyde-3-phosphate dehydrogenase, type I
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05825 transcriptional regulator HexR 0.60 CSW01_18355 aldehyde dehydrogenase low > 62
Shewanella amazonensis SB2B 0.57 Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) 0.60 Sama_1806 glyceraldehyde-3-phosphate dehydrogenase (RefSeq)
Shewanella oneidensis MR-1 0.56 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) 0.60 SO2347 gapA-3 glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) 0.60 4
Shewanella sp. ANA-3 0.56 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) 0.60 Shewana3_2122 glyceraldehyde-3-phosphate dehydrogenase (RefSeq) 0.82 5
Shewanella loihica PV-4 0.55 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) 0.61 Shew_2000 glyceraldehyde-3-phosphate dehydrogenase (RefSeq) 0.76 2
Alteromonas macleodii MIT1002 0.52 MIT1002_02408 putative HTH-type transcriptional regulator YbbH 0.60 MIT1002_02394 Glyceraldehyde-3-phosphate dehydrogenase

Not shown: 26 genomes with orthologs for PS417_22115 only; 1 genomes with orthologs for PS417_07640 only