Conservation of cofitness between HP15_2099 and HP15_1398 in Marinobacter adhaerens HP15

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2099 DEAD/DEAH box helicase domain protein 1.0 HP15_1398 tRNA-dihydrouridine synthase C 0.40 9
Pseudomonas putida KT2440 0.52 PP_1295 ATP-dependent RNA helicase RhlB 0.50 PP_1981 tRNA-dihydrouridine synthase C low > 96
Pseudomonas stutzeri RCH2 0.51 Psest_3166 Superfamily II DNA and RNA helicases 0.53 Psest_2595 tRNA-dihydrouridine synthase low > 67
Pseudomonas sp. S08-1 0.51 OH686_17780 ATP-dependent RNA helicase RhlB 0.51 OH686_04505 tRNA-dihydrouridine(16) synthase low > 80
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_920 ATP-dependent RNA helicase RhlB 0.51 Pf1N1B4_19 tRNA-dihydrouridine synthase C (EC 1.-.-.-) low > 87
Acinetobacter radioresistens SK82 0.50 MPMX26_01113 ATP-dependent RNA helicase RhlB 0.47 MPMX26_02471 tRNA-dihydrouridine(16) synthase low > 36
Pantoea sp. MT58 0.43 IAI47_18535 ATP-dependent RNA helicase RhlB 0.39 IAI47_13430 tRNA dihydrouridine(16) synthase DusC low > 76
Shewanella loihica PV-4 0.42 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) 0.48 Shew_2242 dihydrouridine synthase, DuS (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.42 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB 0.39 LU632_RS09220 dusC tRNA dihydrouridine(16) synthase DusC low > 74
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4451 Superfamily II DNA and RNA helicases 0.40 EX28DRAFT_0417 tRNA-dihydrouridine synthase low > 76
Serratia liquefaciens MT49 0.42 IAI46_00575 ATP-dependent RNA helicase RhlB 0.40 IAI46_06650 tRNA dihydrouridine(16) synthase DusC low > 86
Dickeya dianthicola 67-19 0.42 HGI48_RS20225 ATP-dependent RNA helicase RhlB 0.38 HGI48_RS08810 tRNA dihydrouridine(16) synthase DusC low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2892 ATP-dependent RNA helicase RhlB 0.39 GFF3804 tRNA-dihydrouridine synthase C (EC 1.-.-.-) low > 78
Enterobacter sp. TBS_079 0.42 MPMX20_04492 ATP-dependent RNA helicase RhlB 0.40 MPMX20_03112 tRNA-dihydrouridine(16) synthase low > 85
Dickeya dadantii 3937 0.41 DDA3937_RS20080 ATP-dependent RNA helicase RhlB 0.38 DDA3937_RS08715 tRNA dihydrouridine(16) synthase DusC low > 74
Escherichia coli ECOR38 0.41 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB 0.41 HEPCGN_22850 dusC tRNA dihydrouridine(16) synthase DusC low > 85
Escherichia coli BW25113 0.41 b3780 rhlB ATP-dependent RNA helicase (NCBI) 0.40 b2140 dusC tRNA-dihydrouridine synthase C (NCBI) low > 76
Escherichia coli ECRC98 0.41 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB 0.40 JDDGAC_27570 dusC tRNA dihydrouridine(16) synthase DusC — —
Escherichia coli ECRC62 0.41 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB 0.40 BNILDI_14105 dusC tRNA dihydrouridine(16) synthase DusC — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB 0.40 ECOLIN_RS25475 tRNA dihydrouridine(16) synthase DusC — —
Escherichia fergusonii Becca 0.41 EFB2_04858 ATP-dependent RNA helicase RhlB 0.40 EFB2_01716 tRNA-dihydrouridine(16) synthase low > 86
Escherichia coli BL21 0.41 ECD_03658 ATP-dependent RNA helicase 0.40 ECD_02069 tRNA-dihydrouridine synthase C low > 60
Dickeya dianthicola ME23 0.41 DZA65_RS21270 ATP-dependent RNA helicase RhlB 0.38 DZA65_RS09115 tRNA dihydrouridine(16) synthase DusC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB 0.40 OHPLBJKB_01571 tRNA-dihydrouridine(16) synthase low > 73
Escherichia coli ECRC99 0.41 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB 0.40 KEDOAH_04570 dusC tRNA dihydrouridine(16) synthase DusC — —
Escherichia coli ECRC101 0.41 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB 0.40 OKFHMN_23615 dusC tRNA dihydrouridine(16) synthase DusC — —
Escherichia coli ECOR27 0.41 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB 0.40 NOLOHH_15155 dusC tRNA dihydrouridine(16) synthase DusC low > 57
Escherichia coli ECRC101 0.41 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB 0.40 MCAODC_14665 dusC tRNA dihydrouridine(16) synthase DusC — —
Escherichia coli ECRC102 0.41 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB 0.40 NIAGMN_21380 dusC tRNA dihydrouridine(16) synthase DusC — —
Pectobacterium carotovorum WPP14 0.41 HER17_RS01130 ATP-dependent RNA helicase RhlB 0.40 HER17_RS13295 tRNA dihydrouridine(16) synthase DusC low > 75
Shewanella sp. ANA-3 0.41 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) 0.46 Shewana3_2452 dihydrouridine synthase, DuS (RefSeq) low > 73
Klebsiella michiganensis M5al 0.41 BWI76_RS01065 ATP-dependent RNA helicase RhlB 0.40 BWI76_RS19565 tRNA dihydrouridine(16) synthase DusC low > 92
Rahnella sp. WP5 0.40 EX31_RS15040 ATP-dependent RNA helicase RhlB 0.40 EX31_RS23800 tRNA dihydrouridine(16) synthase DusC low > 89
Shewanella oneidensis MR-1 0.40 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) 0.45 SO2006 NifR3/Smm1 family protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.40 MIT1002_00515 ATP-dependent RNA helicase RhlB 0.46 MIT1002_01411 putative tRNA-dihydrouridine synthase low > 70
Shewanella amazonensis SB2B 0.40 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) 0.47 Sama_1303 NifR3/Smm1 family protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_01555 ATP-dependent RNA helicase RhlB 0.40 CSW01_05615 tRNA dihydrouridine(16) synthase DusC low > 62

Not shown: 1 genomes with orthologs for HP15_2099 only; 20 genomes with orthologs for HP15_1398 only