Conservation of cofitness between GFF4847 and GFF1396 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4847 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) 1.0 GFF1396 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.72 20
Escherichia coli BL21 0.81 ECD_02637 DUF446 family protein 0.96 ECD_03897 glucosephosphate isomerase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00939 putative protein YqcC 0.96 OHPLBJKB_04021 Glucose-6-phosphate isomerase low > 73
Escherichia coli ECOR27 0.75 NOLOHH_12085 yqcC Uncharacterized protein YqcC 0.96 NOLOHH_05335 pgi glucose-6-phosphate isomerase low > 75
Escherichia coli ECRC62 0.75 BNILDI_10590 yqcC Uncharacterized protein YqcC 0.96 BNILDI_06185 pgi glucose-6-phosphate isomerase low > 75
Escherichia coli BW25113 0.75 b2792 yqcC hypothetical protein (NCBI) 0.96 b4025 pgi glucose-6-phosphate isomerase (NCBI) low > 76
Escherichia fergusonii Becca 0.74 EFB2_01125 putative protein YqcC 0.96 EFB2_04577 Glucose-6-phosphate isomerase low > 86
Escherichia coli ECRC100 0.74 OKFHMN_20205 tRNA pseudouridine synthase C 0.96 OKFHMN_13175 pgi glucose-6-phosphate isomerase low > 80
Escherichia coli ECRC98 0.74 JDDGAC_23870 tRNA pseudouridine synthase C 0.96 JDDGAC_16800 pgi glucose-6-phosphate isomerase low > 86
Escherichia coli ECRC101 0.74 MCAODC_10730 tRNA pseudouridine synthase C 0.96 MCAODC_03675 pgi glucose-6-phosphate isomerase low > 87
Escherichia coli ECOR38 0.74 HEPCGN_19460 tRNA pseudouridine synthase C 0.96 HEPCGN_11685 pgi glucose-6-phosphate isomerase low > 87
Escherichia coli ECRC102 0.74 NIAGMN_17975 tRNA pseudouridine synthase C 0.96 NIAGMN_10925 pgi glucose-6-phosphate isomerase
Escherichia coli ECRC99 0.74 KEDOAH_07925 tRNA pseudouridine synthase C 0.96 KEDOAH_14985 pgi glucose-6-phosphate isomerase
Escherichia coli Nissle 1917 0.74 ECOLIN_RS15555 YqcC family protein 0.96 ECOLIN_RS23240 glucose-6-phosphate isomerase low > 55
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2873 Uncharacterized protein conserved in bacteria 0.96 EX28DRAFT_4318 Glucose-6-phosphate isomerase low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_03662 putative protein YqcC 0.95 MPMX20_00241 Glucose-6-phosphate isomerase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS22855 hypothetical protein 0.96 BWI76_RS01800 glucose-6-phosphate isomerase low > 92
Erwinia tracheiphila SCR3 0.48 LU632_RS06290 YqcC family protein 0.89 LU632_RS22365 pgi glucose-6-phosphate isomerase low > 74
Pantoea sp. MT58 0.48 IAI47_04060 YqcC family protein 0.89 IAI47_17965 glucose-6-phosphate isomerase low > 76
Dickeya dianthicola 67-19 0.43 HGI48_RS05080 YqcC family protein 0.89 HGI48_RS19100 glucose-6-phosphate isomerase low > 71
Pectobacterium carotovorum WPP14 0.43 HER17_RS16370 YqcC family protein 0.89 HER17_RS02340 glucose-6-phosphate isomerase low > 75
Dickeya dianthicola ME23 0.42 DZA65_RS05420 YqcC family protein 0.89 DZA65_RS20220 glucose-6-phosphate isomerase low > 75
Serratia liquefaciens MT49 0.42 IAI46_20305 YqcC family protein 0.89 IAI46_23090 glucose-6-phosphate isomerase low > 86
Dickeya dadantii 3937 0.42 DDA3937_RS05080 YqcC family protein 0.90 DDA3937_RS19015 glucose-6-phosphate isomerase low > 74
Rahnella sp. WP5 0.38 EX31_RS13070 YqcC family protein 0.88 EX31_RS11815 glucose-6-phosphate isomerase low > 89
Pseudomonas sp. S08-1 0.31 OH686_08140 Uncharacterized protein YqcC 0.50 OH686_17230 Glucose-6-phosphate isomerase
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5173 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) 0.49 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9) low > 103
Pseudomonas sp. RS175 0.30 PFR28_03701 hypothetical protein 0.49 PFR28_03724 Glucose-6-phosphate isomerase low > 88
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_16160 pseudouridine synthase 0.49 AO356_16050 glucose-6-phosphate isomerase low > 104
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1537 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) 0.49 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9)
Pseudomonas stutzeri RCH2 0.28 Psest_1034 Uncharacterized protein conserved in bacteria 0.49 Psest_0993 Glucose-6-phosphate isomerase
Shewanella sp. ANA-3 0.28 Shewana3_2825 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) 0.51 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_04550 pseudouridine synthase 0.80 CSW01_01965 glucose-6-phosphate isomerase low > 62
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_14485 pseudouridine synthase 0.48 AO353_14370 glucose-6-phosphate isomerase low > 101
Shewanella oneidensis MR-1 0.27 SO1619 conserved hypothetical protein (NCBI ptt file) 0.52 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file)
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0844 Protein of unknown function DUF446 0.48 Psyr_0826 glucose-6-phosphate isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0844 Protein of unknown function DUF446 0.48 Psyr_0826 glucose-6-phosphate isomerase low > 86
Pseudomonas putida KT2440 0.23 PP_4681 conserved protein of unknown function 0.50 PP_4701 glucose-6-phosphate isomerase low > 96

Not shown: 0 genomes with orthologs for GFF4847 only; 52 genomes with orthologs for GFF1396 only