Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF4847 | | Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) | 1.0 | GFF1396 | | Glucose-6-phosphate isomerase (EC 5.3.1.9) | 0.72 | 20 |
Escherichia coli BL21 | 0.81 | ECD_02637 | | DUF446 family protein | 0.96 | ECD_03897 | | glucosephosphate isomerase | low | > 61 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.81 | OHPLBJKB_00939 | | putative protein YqcC | 0.96 | OHPLBJKB_04021 | | Glucose-6-phosphate isomerase | low | > 73 |
Escherichia coli ECOR27 | 0.75 | NOLOHH_12085 | yqcC | Uncharacterized protein YqcC | 0.96 | NOLOHH_05335 | pgi | glucose-6-phosphate isomerase | low | > 75 |
Escherichia coli ECRC62 | 0.75 | BNILDI_10590 | yqcC | Uncharacterized protein YqcC | 0.96 | BNILDI_06185 | pgi | glucose-6-phosphate isomerase | low | > 75 |
Escherichia coli BW25113 | 0.75 | b2792 | yqcC | hypothetical protein (NCBI) | 0.96 | b4025 | pgi | glucose-6-phosphate isomerase (NCBI) | low | > 76 |
Escherichia fergusonii Becca | 0.74 | EFB2_01125 | | putative protein YqcC | 0.96 | EFB2_04577 | | Glucose-6-phosphate isomerase | low | > 86 |
Escherichia coli ECRC100 | 0.74 | OKFHMN_20205 | | tRNA pseudouridine synthase C | 0.96 | OKFHMN_13175 | pgi | glucose-6-phosphate isomerase | low | > 80 |
Escherichia coli ECRC98 | 0.74 | JDDGAC_23870 | | tRNA pseudouridine synthase C | 0.96 | JDDGAC_16800 | pgi | glucose-6-phosphate isomerase | low | > 86 |
Escherichia coli ECRC101 | 0.74 | MCAODC_10730 | | tRNA pseudouridine synthase C | 0.96 | MCAODC_03675 | pgi | glucose-6-phosphate isomerase | low | > 87 |
Escherichia coli ECOR38 | 0.74 | HEPCGN_19460 | | tRNA pseudouridine synthase C | 0.96 | HEPCGN_11685 | pgi | glucose-6-phosphate isomerase | low | > 87 |
Escherichia coli ECRC102 | 0.74 | NIAGMN_17975 | | tRNA pseudouridine synthase C | 0.96 | NIAGMN_10925 | pgi | glucose-6-phosphate isomerase | — | — |
Escherichia coli ECRC99 | 0.74 | KEDOAH_07925 | | tRNA pseudouridine synthase C | 0.96 | KEDOAH_14985 | pgi | glucose-6-phosphate isomerase | — | — |
Escherichia coli Nissle 1917 | 0.74 | ECOLIN_RS15555 | | YqcC family protein | 0.96 | ECOLIN_RS23240 | | glucose-6-phosphate isomerase | low | > 55 |
Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_2873 | | Uncharacterized protein conserved in bacteria | 0.96 | EX28DRAFT_4318 | | Glucose-6-phosphate isomerase | low | > 76 |
Enterobacter sp. TBS_079 | 0.66 | MPMX20_03662 | | putative protein YqcC | 0.95 | MPMX20_00241 | | Glucose-6-phosphate isomerase | low | > 85 |
Klebsiella michiganensis M5al | 0.54 | BWI76_RS22855 | | hypothetical protein | 0.96 | BWI76_RS01800 | | glucose-6-phosphate isomerase | low | > 92 |
Erwinia tracheiphila SCR3 | 0.48 | LU632_RS06290 | | YqcC family protein | 0.89 | LU632_RS22365 | pgi | glucose-6-phosphate isomerase | low | > 74 |
Pantoea sp. MT58 | 0.48 | IAI47_04060 | | YqcC family protein | 0.89 | IAI47_17965 | | glucose-6-phosphate isomerase | low | > 76 |
Dickeya dianthicola 67-19 | 0.43 | HGI48_RS05080 | | YqcC family protein | 0.89 | HGI48_RS19100 | | glucose-6-phosphate isomerase | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS16370 | | YqcC family protein | 0.89 | HER17_RS02340 | | glucose-6-phosphate isomerase | low | > 75 |
Dickeya dianthicola ME23 | 0.42 | DZA65_RS05420 | | YqcC family protein | 0.89 | DZA65_RS20220 | | glucose-6-phosphate isomerase | low | > 75 |
Serratia liquefaciens MT49 | 0.42 | IAI46_20305 | | YqcC family protein | 0.89 | IAI46_23090 | | glucose-6-phosphate isomerase | low | > 86 |
Dickeya dadantii 3937 | 0.42 | DDA3937_RS05080 | | YqcC family protein | 0.90 | DDA3937_RS19015 | | glucose-6-phosphate isomerase | low | > 74 |
Rahnella sp. WP5 | 0.38 | EX31_RS13070 | | YqcC family protein | 0.88 | EX31_RS11815 | | glucose-6-phosphate isomerase | low | > 89 |
Pseudomonas sp. S08-1 | 0.31 | OH686_08140 | | Uncharacterized protein YqcC | 0.50 | OH686_17230 | | Glucose-6-phosphate isomerase | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_5173 | | Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) | 0.49 | Pf6N2E2_5150 | | Glucose-6-phosphate isomerase (EC 5.3.1.9) | low | > 103 |
Pseudomonas sp. RS175 | 0.30 | PFR28_03701 | | hypothetical protein | 0.49 | PFR28_03724 | | Glucose-6-phosphate isomerase | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_16160 | | pseudouridine synthase | 0.49 | AO356_16050 | | glucose-6-phosphate isomerase | low | > 104 |
Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_1537 | | Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) | 0.49 | PfGW456L13_1518 | | Glucose-6-phosphate isomerase (EC 5.3.1.9) | — | — |
Pseudomonas stutzeri RCH2 | 0.28 | Psest_1034 | | Uncharacterized protein conserved in bacteria | 0.49 | Psest_0993 | | Glucose-6-phosphate isomerase | — | — |
Shewanella sp. ANA-3 | 0.28 | Shewana3_2825 | | dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) | 0.51 | Shewana3_3148 | pgi | glucose-6-phosphate isomerase (RefSeq) | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.28 | CSW01_04550 | | pseudouridine synthase | 0.80 | CSW01_01965 | | glucose-6-phosphate isomerase | low | > 62 |
Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_14485 | | pseudouridine synthase | 0.48 | AO353_14370 | | glucose-6-phosphate isomerase | low | > 101 |
Shewanella oneidensis MR-1 | 0.27 | SO1619 | | conserved hypothetical protein (NCBI ptt file) | 0.52 | SO3547 | pgi | glucose-6-phosphate isomerase (NCBI ptt file) | — | — |
Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_0844 | | Protein of unknown function DUF446 | 0.48 | Psyr_0826 | | glucose-6-phosphate isomerase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_0844 | | Protein of unknown function DUF446 | 0.48 | Psyr_0826 | | glucose-6-phosphate isomerase | low | > 86 |
Pseudomonas putida KT2440 | 0.23 | PP_4681 | | conserved protein of unknown function | 0.50 | PP_4701 | | glucose-6-phosphate isomerase | low | > 96 |