Conservation of cofitness between Psest_2133 and Psest_1217 in Pseudomonas stutzeri RCH2

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2133 Uncharacterized protein conserved in bacteria 1.0 Psest_1217 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.32 17
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3998 putative exported protein 0.72 Pf1N1B4_888 Transglycosylase, Slt family low > 87
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_01045 hypothetical protein 0.69 AO356_17515 murein transglycosylase low > 104
Pseudomonas sp. RS175 0.58 PFR28_02751 Translocation and assembly module subunit TamB 0.70 PFR28_03519 Membrane-bound lytic murein transglycosylase F low > 88
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_145 putative exported protein 0.67 Pf6N2E2_5430 Transglycosylase, Slt family low > 103
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_2602 putative exported protein 0.71 PfGW456L13_4836 Transglycosylase, Slt family low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_27860 hypothetical protein 0.73 AO353_04490 murein transglycosylase low > 101
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS18915 translocation/assembly module TamB 0.74 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS18915 translocation/assembly module TamB 0.74 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2479 Protein of unknown function DUF490 0.73 Psyr_1268 extracellular solute-binding protein, family 3:SLT low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2479 Protein of unknown function DUF490 0.73 Psyr_1268 extracellular solute-binding protein, family 3:SLT low > 86
Pseudomonas simiae WCS417 0.56 PS417_16965 hypothetical protein 0.74 PS417_23025 murein transglycosylase 0.18 50
Pseudomonas putida KT2440 0.54 PP_2893 conserved exported protein of unknown function 0.71 PP_1036 membrane-bound lytic murein transglycosylase F low > 96
Marinobacter adhaerens HP15 0.36 HP15_2340 protein containing DUF490 0.43 HP15_1238 transglycosylase, Slt family protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF875 Uncharacterized protein YtfN 0.31 GFF2461 Transglycosylase, Slt family low > 78
Escherichia fergusonii Becca 0.16 EFB2_04308 Translocation and assembly module subunit TamB 0.31 EFB2_01338 Membrane-bound lytic murein transglycosylase F low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_03812 Translocation and assembly module subunit TamB 0.31 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F low > 73
Enterobacter asburiae PDN3 0.16 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria 0.30 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 76
Escherichia coli ECRC62 0.16 BNILDI_07260 tamB autotransporter assembly complex protein TamB 0.31 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli ECOR27 0.16 NOLOHH_04255 tamB autotransporter assembly complex protein TamB 0.31 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF low > 57
Escherichia coli Nissle 1917 0.16 ECOLIN_RS24515 autotransporter assembly complex protein TamB 0.31 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF low > 52
Escherichia coli ECRC102 0.16 NIAGMN_09845 tamB autotransporter assembly complex protein TamB 0.31 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli ECRC98 0.16 JDDGAC_15635 tamB autotransporter assembly complex protein TamB 0.31 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli ECRC101 0.16 OKFHMN_11995 tamB autotransporter assembly complex protein TamB 0.31 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli ECRC101 0.16 MCAODC_02510 tamB autotransporter assembly complex protein TamB 0.31 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli ECRC99 0.16 KEDOAH_16160 tamB autotransporter assembly complex protein TamB 0.31 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli BW25113 0.16 b4221 ytfN hypothetical protein (NCBI) 0.31 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) low > 76
Escherichia coli ECOR38 0.16 HEPCGN_10195 tamB autotransporter assembly complex protein TamB 0.31 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF low > 85
Klebsiella michiganensis M5al 0.16 BWI76_RS02780 translocation and assembly module TamB 0.33 BWI76_RS21275 lytic transglycosylase F low > 92
Erwinia tracheiphila SCR3 0.16 LU632_RS02110 translocation/assembly module TamB 0.30 LU632_RS17980 mltF membrane-bound lytic murein transglycosylase MltF low > 74
Enterobacter sp. TBS_079 0.16 MPMX20_00504 Translocation and assembly module subunit TamB 0.30 MPMX20_03427 Membrane-bound lytic murein transglycosylase F low > 85
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_12900 DUF490 domain-containing protein 0.35 CSW01_04460 lytic transglycosylase F low > 62
Dickeya dianthicola ME23 0.15 DZA65_RS18290 translocation/assembly module TamB 0.33 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF low > 75
Dickeya dianthicola 67-19 0.15 HGI48_RS17210 translocation/assembly module TamB 0.33 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS17155 translocation/assembly module TamB 0.33 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF low > 74
Shewanella amazonensis SB2B 0.13 Sama_1615 hypothetical protein (RefSeq) 0.35 Sama_2351 Slt family transglycosylase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.11 MIT1002_04049 Autotransporter assembly factor TamB 0.29 MIT1002_01026 Membrane-bound lytic murein transglycosylase F precursor low > 70

Not shown: 3 genomes with orthologs for Psest_2133 only; 17 genomes with orthologs for Psest_1217 only