Conservation of cofitness between EX31_RS21460 and EX31_RS18540 in Rahnella sp. WP5

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21460 LysR family transcriptional regulator ArgP 1.0 EX31_RS18540 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD 0.81 9
Serratia liquefaciens MT49 0.93 IAI46_20910 LysR family transcriptional regulator ArgP 0.71 IAI46_08535 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 86
Pantoea sp. MT58 0.92 IAI47_03715 LysR family transcriptional regulator ArgP 0.60 IAI47_12925 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02715 LysR family transcriptional regulator ArgP 0.70 HER17_RS12370 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.72 DDA3937_RS09580 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 74
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.66 EX28DRAFT_2045 thiol reductant ABC exporter, CydD subunit low > 76
Dickeya dianthicola ME23 0.91 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.71 DZA65_RS09905 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Erwinia tracheiphila SCR3 0.91 LU632_RS05845 LysR family transcriptional regulator ArgP 0.56 LU632_RS09725 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Enterobacter sp. TBS_079 0.91 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.66 MPMX20_01549 ATP-binding/permease protein CydD low > 85
Dickeya dianthicola 67-19 0.91 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.70 HGI48_RS09595 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Klebsiella michiganensis M5al 0.91 BWI76_RS23930 transcriptional regulator ArgP 0.65 BWI76_RS09640 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 92
Escherichia coli BL21 0.90 ECD_02747 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 0.64 ECD_00891 glutathione/cysteine ABC transporter export permease/ATPase — —
Escherichia coli ECRC101 0.90 MCAODC_09970 argP DNA-binding transcriptional regulator ArgP 0.64 MCAODC_24975 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC98 0.90 JDDGAC_23090 argP DNA-binding transcriptional regulator ArgP 0.64 JDDGAC_09395 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC62 0.90 BNILDI_09890 argP DNA-binding transcriptional regulator ArgP 0.64 BNILDI_20410 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC100 0.90 OKFHMN_19450 argP DNA-binding transcriptional regulator ArgP 0.64 OKFHMN_05585 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECOR38 0.90 HEPCGN_18750 argP DNA-binding transcriptional regulator ArgP 0.64 HEPCGN_22925 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3015 Chromosome initiation inhibitor 0.65 GFF4891 Transport ATP-binding protein CydD low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00800 HTH-type transcriptional regulator ArgP 0.64 OHPLBJKB_02781 ATP-binding/permease protein CydD — —
Escherichia coli ECRC102 0.90 NIAGMN_17215 argP DNA-binding transcriptional regulator ArgP 0.64 NIAGMN_03305 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECRC99 0.90 KEDOAH_08690 argP DNA-binding transcriptional regulator ArgP 0.64 KEDOAH_22150 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli ECOR27 0.90 NOLOHH_11355 argP DNA-binding transcriptional regulator ArgP 0.64 NOLOHH_22155 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli Nissle 1917 0.90 ECOLIN_RS16225 DNA-binding transcriptional regulator ArgP 0.64 ECOLIN_RS04720 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD — —
Escherichia coli BW25113 0.90 b2916 argP chromosome replication initiation inhibitor protein (NCBI) 0.64 b0887 cydD fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) — —
Escherichia fergusonii Becca 0.90 EFB2_00987 HTH-type transcriptional regulator ArgP 0.64 EFB2_03174 ATP-binding/permease protein CydD — —
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02560 chromosome initiation inhibitor 0.56 CSW01_05980 thiol reductant ABC exporter subunit CydD — —
Shewanella amazonensis SB2B 0.39 Sama_2987 chromosome replication initiation inhibitor protein (RefSeq) 0.47 Sama_2679 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 62
Shewanella loihica PV-4 0.34 Shew_1844 chromosome replication initiation inhibitor protein (RefSeq) 0.53 Shew_0613 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 60
Shewanella oneidensis MR-1 0.33 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.51 SO3780 cydD ABC transporter, ATP-binding protein CydD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.33 Shewana3_1652 chromosome replication initiation inhibitor protein (RefSeq) 0.52 Shewana3_0812 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 73
Marinobacter adhaerens HP15 0.28 HP15_868 transcriptional regulator, LysR family 0.29 HP15_1748 cysteine/glutathione ABC transporter membrane/ATP-binding component low > 73
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.1463.1 Transcriptional regulator lysR family 0.24 Xcc-8004.2334.1 Transport ATP-binding protein CydD low > 74
Alteromonas macleodii MIT1002 0.25 MIT1002_00129 OriC replication inhibitor 0.17 MIT1002_03846 ATP-binding/permease protein CydD low > 70
Mycobacterium tuberculosis H37Rv 0.24 Rv1985c Probable transcriptional regulatory protein (probably LysR-family) 0.19 Rv1621c Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydD low > 58

Not shown: 37 genomes with orthologs for EX31_RS21460 only; 4 genomes with orthologs for EX31_RS18540 only