Conservation of cofitness between EX31_RS15065 and EX31_RS06335 in Rahnella sp. WP5

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS15065 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 1.0 EX31_RS06335 transcriptional regulator TyrR 0.56 19
Serratia liquefaciens MT49 0.79 IAI46_00600 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.84 IAI46_13470 transcriptional regulator TyrR low > 86
Erwinia tracheiphila SCR3 0.77 LU632_RS24240 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.74 LU632_RS11530 tyrR transcriptional regulator TyrR low > 74
Klebsiella michiganensis M5al 0.76 BWI76_RS01090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 BWI76_RS12485 TyrR family transcriptional regulator low > 92
Pectobacterium carotovorum WPP14 0.75 HER17_RS01155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.74 HER17_RS09575 transcriptional regulator TyrR low > 75
Enterobacter asburiae PDN3 0.75 EX28DRAFT_4456 UDP-N-acetylglucosamine 2-epimerase 0.71 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism low > 76
Escherichia coli BL21 0.75 ECD_03664 UDP-N-acetyl glucosamine-2-epimerase 0.71 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase low > 61
Escherichia fergusonii Becca 0.75 EFB2_04853 UDP-N-acetylglucosamine 2-epimerase 0.71 EFB2_02604 Transcriptional regulatory protein TyrR 0.60 72
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_04268 UDP-N-acetylglucosamine 2-epimerase 0.71 OHPLBJKB_02359 Transcriptional regulatory protein TyrR low > 73
Escherichia coli Nissle 1917 0.75 ECOLIN_RS21735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.71 ECOLIN_RS07945 transcriptional regulator TyrR — —
Escherichia coli BW25113 0.75 b3786 rffE UDP-N-acetyl glucosamine-2-epimerase (NCBI) 0.71 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) 0.26 66
Pantoea sp. MT58 0.75 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.77 IAI47_09440 transcriptional regulator TyrR low > 76
Escherichia coli ECRC98 0.75 JDDGAC_18195 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 JDDGAC_04850 tyrR transcriptional regulator TyrR low > 86
Escherichia coli ECRC99 0.75 KEDOAH_13580 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 KEDOAH_26470 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC102 0.75 NIAGMN_12325 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 NIAGMN_26475 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC100 0.75 OKFHMN_14570 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 OKFHMN_02305 tyrR transcriptional regulator TyrR 0.94 5
Escherichia coli ECRC101 0.75 MCAODC_05075 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 MCAODC_15965 tyrR transcriptional regulator TyrR low > 87
Escherichia coli ECRC62 0.75 BNILDI_04820 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.71 BNILDI_18150 tyrR transcriptional regulator TyrR low > 75
Escherichia coli ECOR27 0.75 NOLOHH_06705 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.71 NOLOHH_20000 tyrR transcriptional regulator TyrR 0.83 11
Escherichia coli ECOR38 0.75 HEPCGN_13280 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.72 HEPCGN_25885 tyrR transcriptional regulator TyrR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.72 GFF2679 Transcriptional repressor protein TyrR low > 78
Dickeya dadantii 3937 0.73 DDA3937_RS20055 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.74 DDA3937_RS12390 transcriptional regulator TyrR low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS21245 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.74 DZA65_RS12910 transcriptional regulator TyrR low > 75
Enterobacter sp. TBS_079 0.72 MPMX20_04487 UDP-N-acetylglucosamine 2-epimerase 0.72 MPMX20_02454 Transcriptional regulatory protein TyrR low > 85
Dickeya dianthicola 67-19 0.72 HGI48_RS20200 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.74 HGI48_RS12460 transcriptional regulator TyrR low > 71
Shewanella amazonensis SB2B 0.71 Sama_2261 UDP-N-acetylglucosamine 2-epimerase (RefSeq) 0.48 Sama_2220 transcriptional regulatory protein TyrR (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_04705 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.52 CSW01_06605 transcriptional regulator TyrR low > 62
Pseudomonas sp. S08-1 0.68 OH686_14385 UDP-N-acetylglucosamine 2-epimerase 0.42 OH686_21240 Phenylalanine hydroxylase transcriptional activator PhhR low > 80
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_3995 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.41 PfGW456L13_4393 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas sp. RS175 0.66 PFR28_00916 UDP-N-acetylglucosamine 2-epimerase 0.42 PFR28_00803 Transcriptional regulatory protein TyrR low > 88
Pseudomonas putida KT2440 0.64 PP_1811 UDP-N-acetylglucosamine-2-epimerase 0.40 PP_4489 sigma-54 dependent transcriptional regulator low > 96
Pseudomonas stutzeri RCH2 0.59 Psest_0249 UDP-N-acetylglucosamine 2-epimerase 0.40 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism low > 67
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_201 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.41 Pf6N2E2_2629 Phenylalanine hydroxylase transcriptional activator PhhR low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase 0.38 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase 0.38 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_00800 UDP-N-acetylglucosamine 2-epimerase 0.42 AO356_03970 AAA family ATPase low > 104
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_01990 UDP-N-acetylglucosamine 2-epimerase 0.42 AO353_18590 AAA family ATPase low > 101
Pseudomonas simiae WCS417 0.14 PS417_08175 UDP-N-acetylglucosamine 2-epimerase 0.41 PS417_19895 ATPase AAA — —
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.41 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Pseudomonas fluorescens SBW25 0.14 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.41 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109

Not shown: 31 genomes with orthologs for EX31_RS15065 only; 8 genomes with orthologs for EX31_RS06335 only