Conservation of cofitness between ECD_02979 and ECD_04265 in Escherichia coli BL21

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02979 L-serine dehydratase 3, anaerobic 1.0 ECD_04265 DNA repair protein 0.39 34
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00588 L-serine dehydratase TdcG 1.00 OHPLBJKB_03672 DNA repair protein RadA low > 73
Escherichia coli ECOR38 1.00 HEPCGN_17260 tdcG L-serine ammonia-lyase 1.00 HEPCGN_09195 radA DNA repair protein RadA low > 87
Escherichia coli BW25113 1.00 b4471 tdcG L-serine dehydratase 3 (NCBI) 1.00 b4389 radA predicted repair protein (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_01320 tdcG L-serine ammonia-lyase 1.00 BNILDI_08075 radA DNA repair protein RadA low > 75
Escherichia coli ECOR27 1.00 NOLOHH_10205 tdcG L-serine ammonia-lyase 1.00 NOLOHH_03520 radA DNA repair protein RadA low > 75
Escherichia coli ECRC99 0.99 KEDOAH_09720 tdcG L-serine ammonia-lyase 1.00 KEDOAH_16960 radA DNA repair protein RadA
Escherichia fergusonii Becca 0.99 EFB2_00702 L-serine dehydratase TdcG 1.00 EFB2_04057 DNA repair protein RadA low > 86
Escherichia coli ECRC101 0.99 MCAODC_08940 tdcG L-serine ammonia-lyase 1.00 MCAODC_01710 radA DNA repair protein RadA low > 87
Escherichia coli ECRC98 0.99 JDDGAC_22060 tdcG L-serine ammonia-lyase 1.00 JDDGAC_14790 radA DNA repair protein RadA low > 86
Escherichia coli ECRC100 0.99 OKFHMN_18425 tdcG L-serine ammonia-lyase 1.00 OKFHMN_11195 radA DNA repair protein RadA low > 80
Escherichia coli ECRC102 0.99 NIAGMN_16190 tdcG L-serine ammonia-lyase 1.00 NIAGMN_09045 radA DNA repair protein RadA
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17915 L-serine ammonia-lyase 1.00 ECOLIN_RS25190 DNA repair protein RadA low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3206 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.98 GFF1057 DNA repair protein RadA low > 78
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1339 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.60 B158DRAFT_0877 DNA replication and repair protein RadA low > 40
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1601.1 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.59 Xcc-8004.3812.1 DNA repair protein RadA low > 74
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19060 L-serine ammonia-lyase 0.58 ABZR86_RS08845 DNA repair protein RadA low > 74
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS05255 L-serine ammonia-lyase 0.58 LRK54_RS02525 DNA repair protein RadA low > 59
Rhodanobacter denitrificans MT42 0.52 LRK55_RS05035 L-serine ammonia-lyase 0.58 LRK55_RS02280 DNA repair protein RadA low > 63
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_01565 sdaA L-serine ammonia-lyase 0.58 OKGIIK_09580 radA DNA repair protein RadA low > 52
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_03505 serine dehydratase 0.63 AO353_13980 DNA repair protein RadA low > 101
Pseudomonas stutzeri RCH2 0.51 Psest_0784 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.63 Psest_3401 DNA repair protein RadA low > 67
Lysobacter sp. OAE881 0.51 ABIE51_RS16145 L-serine ammonia-lyase 0.57 ABIE51_RS07685 DNA repair protein RadA low > 62
Pseudomonas putida KT2440 0.50 PP_0987 L-serine dehydratase 0.62 PP_4644 DNA repair enzyme low > 96
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3522 L-serine ammonia-lyase 0.64 Psyr_4275 DNA replication and repair protein RadA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3522 L-serine ammonia-lyase 0.64 Psyr_4275 DNA replication and repair protein RadA low > 86
Variovorax sp. SCN45 0.46 GFF3439 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.52 GFF5087 DNA repair protein RadA low > 127
Phaeobacter inhibens DSM 17395 0.42 PGA1_c23770 L-serine dehydratase TdcG 0.41 PGA1_c10840 DNA repair protein RadA low > 62
Azospirillum sp. SherDot2 0.41 MPMX19_04703 L-serine dehydratase TdcG 0.42 MPMX19_00904 DNA repair protein RadA low > 112
Bacteroides thetaiotaomicron VPI-5482 0.31 BT4678 L-serine dehydratase (NCBI ptt file) 0.40 BT2406 putative DNA repair protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS16410 L-serine ammonia-lyase 0.40 HMPREF1058_RS14715 DNA repair protein RadA low > 67
Bacteroides ovatus ATCC 8483 0.30 BACOVA_05536 L-serine ammonia-lyase 0.40 BACOVA_03019 DNA repair protein RadA low > 94
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12245 L-serine ammonia-lyase 0.40 ABI39_RS10420 DNA repair protein RadA low > 72
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS11755 L-serine ammonia-lyase 0.40 HMPREF1181_RS00075 DNA repair protein RadA low > 56
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01410 L-serine ammonia-lyase 0.41 HMPREF1078_RS08395 DNA repair protein RadA low > 61

Not shown: 0 genomes with orthologs for ECD_02979 only; 67 genomes with orthologs for ECD_04265 only