Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BL21 | 1.0 | ECD_02979 | | L-serine dehydratase 3, anaerobic | 1.0 | ECD_04265 | | DNA repair protein | 0.39 | 34 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00588 | | L-serine dehydratase TdcG | 1.00 | OHPLBJKB_03672 | | DNA repair protein RadA | low | > 73 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_17260 | tdcG | L-serine ammonia-lyase | 1.00 | HEPCGN_09195 | radA | DNA repair protein RadA | low | > 87 |
Escherichia coli BW25113 | 1.00 | b4471 | tdcG | L-serine dehydratase 3 (NCBI) | 1.00 | b4389 | radA | predicted repair protein (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 1.00 | BNILDI_01320 | tdcG | L-serine ammonia-lyase | 1.00 | BNILDI_08075 | radA | DNA repair protein RadA | low | > 75 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_10205 | tdcG | L-serine ammonia-lyase | 1.00 | NOLOHH_03520 | radA | DNA repair protein RadA | low | > 75 |
Escherichia coli ECRC99 | 0.99 | KEDOAH_09720 | tdcG | L-serine ammonia-lyase | 1.00 | KEDOAH_16960 | radA | DNA repair protein RadA | — | — |
Escherichia fergusonii Becca | 0.99 | EFB2_00702 | | L-serine dehydratase TdcG | 1.00 | EFB2_04057 | | DNA repair protein RadA | low | > 86 |
Escherichia coli ECRC101 | 0.99 | MCAODC_08940 | tdcG | L-serine ammonia-lyase | 1.00 | MCAODC_01710 | radA | DNA repair protein RadA | low | > 87 |
Escherichia coli ECRC98 | 0.99 | JDDGAC_22060 | tdcG | L-serine ammonia-lyase | 1.00 | JDDGAC_14790 | radA | DNA repair protein RadA | low | > 86 |
Escherichia coli ECRC100 | 0.99 | OKFHMN_18425 | tdcG | L-serine ammonia-lyase | 1.00 | OKFHMN_11195 | radA | DNA repair protein RadA | low | > 80 |
Escherichia coli ECRC102 | 0.99 | NIAGMN_16190 | tdcG | L-serine ammonia-lyase | 1.00 | NIAGMN_09045 | radA | DNA repair protein RadA | — | — |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS17915 | | L-serine ammonia-lyase | 1.00 | ECOLIN_RS25190 | | DNA repair protein RadA | low | > 55 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.87 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.98 | GFF1057 | | DNA repair protein RadA | low | > 78 |
Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_1339 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.60 | B158DRAFT_0877 | | DNA replication and repair protein RadA | low | > 40 |
Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.1601.1 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.59 | Xcc-8004.3812.1 | | DNA repair protein RadA | low | > 74 |
Dyella japonica UNC79MFTsu3.2 | 0.52 | ABZR86_RS19060 | | L-serine ammonia-lyase | 0.58 | ABZR86_RS08845 | | DNA repair protein RadA | low | > 74 |
Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS05255 | | L-serine ammonia-lyase | 0.58 | LRK54_RS02525 | | DNA repair protein RadA | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS05035 | | L-serine ammonia-lyase | 0.58 | LRK55_RS02280 | | DNA repair protein RadA | low | > 63 |
Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_01565 | sdaA | L-serine ammonia-lyase | 0.58 | OKGIIK_09580 | radA | DNA repair protein RadA | low | > 52 |
Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_03505 | | serine dehydratase | 0.63 | AO353_13980 | | DNA repair protein RadA | low | > 101 |
Pseudomonas stutzeri RCH2 | 0.51 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.63 | Psest_3401 | | DNA repair protein RadA | low | > 67 |
Lysobacter sp. OAE881 | 0.51 | ABIE51_RS16145 | | L-serine ammonia-lyase | 0.57 | ABIE51_RS07685 | | DNA repair protein RadA | low | > 62 |
Pseudomonas putida KT2440 | 0.50 | PP_0987 | | L-serine dehydratase | 0.62 | PP_4644 | | DNA repair enzyme | low | > 96 |
Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3522 | | L-serine ammonia-lyase | 0.64 | Psyr_4275 | | DNA replication and repair protein RadA | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3522 | | L-serine ammonia-lyase | 0.64 | Psyr_4275 | | DNA replication and repair protein RadA | low | > 86 |
Variovorax sp. SCN45 | 0.46 | GFF3439 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.52 | GFF5087 | | DNA repair protein RadA | low | > 127 |
Phaeobacter inhibens DSM 17395 | 0.42 | PGA1_c23770 | | L-serine dehydratase TdcG | 0.41 | PGA1_c10840 | | DNA repair protein RadA | low | > 62 |
Azospirillum sp. SherDot2 | 0.41 | MPMX19_04703 | | L-serine dehydratase TdcG | 0.42 | MPMX19_00904 | | DNA repair protein RadA | low | > 112 |
Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT4678 | | L-serine dehydratase (NCBI ptt file) | 0.40 | BT2406 | | putative DNA repair protein (NCBI ptt file) | low | > 81 |
Phocaeicola vulgatus CL09T03C04 | 0.30 | HMPREF1058_RS16410 | | L-serine ammonia-lyase | 0.40 | HMPREF1058_RS14715 | | DNA repair protein RadA | low | > 67 |
Bacteroides ovatus ATCC 8483 | 0.30 | BACOVA_05536 | | L-serine ammonia-lyase | 0.40 | BACOVA_03019 | | DNA repair protein RadA | low | > 94 |
Phocaeicola dorei CL03T12C01 | 0.30 | ABI39_RS12245 | | L-serine ammonia-lyase | 0.40 | ABI39_RS10420 | | DNA repair protein RadA | low | > 72 |
Bacteroides stercoris CC31F | 0.30 | HMPREF1181_RS11755 | | L-serine ammonia-lyase | 0.40 | HMPREF1181_RS00075 | | DNA repair protein RadA | low | > 56 |
Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS01410 | | L-serine ammonia-lyase | 0.41 | HMPREF1078_RS08395 | | DNA repair protein RadA | low | > 61 |
Not shown: 0 genomes with orthologs for ECD_02979 only; 67 genomes with orthologs for ECD_04265 only