Conservation of cofitness between ECD_02953 and ECD_03918 in Escherichia coli BL21

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 1.0 ECD_03918 transcriptional repressor, Zn(II)-binding low > 61
Escherichia coli ECOR38 1.00 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia coli BW25113 1.00 b3084 ygjO putative enzyme (VIMSS) 1.00 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur low > 75
Escherichia coli ECRC62 0.99 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 BNILDI_06315 zur zinc uptake transcriptional repressor Zur low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC100 0.99 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur low > 80
Escherichia coli ECRC98 0.99 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur low > 86
Escherichia coli ECRC99 0.99 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC101 0.99 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 MCAODC_03550 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia coli ECRC102 0.99 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur — —
Escherichia fergusonii Becca 0.99 EFB2_00728 Ribosomal RNA large subunit methyltransferase G 0.99 EFB2_04557 Zinc uptake regulation protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G 1.00 OHPLBJKB_03997 Zinc uptake regulation protein low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3153 16S RNA G1207 methylase RsmC 0.92 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G 0.91 MPMX20_00262 Zinc uptake regulation protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.94 GFF1416 Zinc uptake regulation protein ZUR low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.90 BWI76_RS01890 transcriptional regulator Zur low > 92
Serratia liquefaciens MT49 0.67 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.73 IAI46_22990 zinc uptake transcriptional repressor Zur low > 86
Erwinia tracheiphila SCR3 0.65 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.68 LU632_RS22295 zur zinc uptake transcriptional repressor Zur low > 74
Pectobacterium carotovorum WPP14 0.63 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.70 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Pantoea sp. MT58 0.62 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.67 IAI47_17875 zinc uptake transcriptional repressor Zur low > 76
Dickeya dadantii 3937 0.61 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.72 DDA3937_RS02765 zinc uptake transcriptional repressor Zur low > 74
Rahnella sp. WP5 0.58 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.63 EX31_RS11860 zinc uptake transcriptional repressor Zur low > 89
Dickeya dianthicola 67-19 0.58 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.70 HGI48_RS02740 zinc uptake transcriptional repressor Zur low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.70 DZA65_RS02895 zinc uptake transcriptional repressor Zur low > 75
Alteromonas macleodii MIT1002 0.40 MIT1002_00689 Ribosomal RNA large subunit methyltransferase G 0.38 MIT1002_03799 Zinc uptake regulation protein low > 70
Pseudomonas stutzeri RCH2 0.37 Psest_3440 16S RNA G1207 methylase RsmC 0.26 Psest_4308 Fe2+/Zn2+ uptake regulation proteins — —
Pseudomonas putida KT2440 0.36 PP_4648 Ribosomal RNA large subunit methyltransferase G 0.26 PP_0119 putative zinc uptake regulation protein ZUR low > 96
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_11685 ribosomal RNA large subunit methyltransferase G 0.41 CSW01_01980 transcriptional regulator Zur low > 62
Pseudomonas sp. S08-1 0.35 OH686_16135 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.24 OH686_12240 Zinc uptake regulation protein Zur low > 80
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_13950 50S rRNA methyltransferase 0.28 AO353_10910 Fur family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.27 PfGW456L13_598 Zinc uptake regulation protein ZUR low > 87
Pseudomonas simiae WCS417 0.34 PS417_24335 50S rRNA methyltransferase 0.28 PS417_00385 Fur family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS26260 class I SAM-dependent methyltransferase 0.28 PFLU_RS00375 transcriptional repressor — —
Pseudomonas fluorescens SBW25 0.34 PFLU_RS26260 class I SAM-dependent methyltransferase 0.28 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.28 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.28 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas sp. RS175 0.33 PFR28_03798 Ribosomal RNA large subunit methyltransferase G 0.28 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15650 50S rRNA methyltransferase 0.28 AO356_11485 Fur family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.28 Pf6N2E2_4166 Zinc uptake regulation protein ZUR — —
Marinobacter adhaerens HP15 0.22 HP15_2265 rRNA (guanine-N2-)-methyltransferase, RsmD 0.27 HP15_3521 zinc uptake regulation protein low > 73

Not shown: 5 genomes with orthologs for ECD_02953 only; 17 genomes with orthologs for ECD_03918 only