Conservation of cofitness between ECD_01774 and ECD_03198 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01774 ribonuclease D 1.0 ECD_03198 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 0.66 10
Escherichia coli BW25113 1.00 b1804 rnd ribonuclease D (NCBI) 1.00 b3347 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01929 Ribonuclease D 1.00 OHPLBJKB_00356 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA low > 73
Escherichia coli ECRC101 0.99 OKFHMN_26605 rnd ribonuclease D 1.00 OKFHMN_17295 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECRC62 0.99 BNILDI_15910 rnd ribonuclease D 1.00 BNILDI_02425 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECRC99 0.99 KEDOAH_01505 rnd ribonuclease D 1.00 KEDOAH_10845 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECRC98 0.99 JDDGAC_01180 rnd ribonuclease D 1.00 JDDGAC_20925 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECOR27 0.99 NOLOHH_17125 rnd ribonuclease D 1.00 NOLOHH_09095 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECRC102 0.99 NIAGMN_01460 rnd ribonuclease D 1.00 NIAGMN_15065 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECRC101 0.99 MCAODC_18805 rnd ribonuclease D 1.00 MCAODC_07825 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia coli ECOR38 0.98 HEPCGN_04995 rnd ribonuclease D 1.00 HEPCGN_16125 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase low > 85
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10035 ribonuclease D 1.00 ECOLIN_RS19170 FKBP-type peptidyl-prolyl cis-trans isomerase — —
Escherichia fergusonii Becca 0.98 EFB2_02196 Ribonuclease D 1.00 EFB2_00476 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF2819 Ribonuclease D (EC 3.1.26.3) 0.79 GFF3725 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) 0.64 78
Enterobacter sp. TBS_079 0.84 MPMX20_02710 Ribonuclease D 0.80 MPMX20_04240 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0755 ribonuclease D 0.75 EX28DRAFT_4183 FKBP-type peptidyl-prolyl cis-trans isomerases 1 low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS17795 ribonuclease D 0.83 BWI76_RS25910 peptidyl-prolyl cis-trans isomerase low > 92
Dickeya dadantii 3937 0.69 DDA3937_RS11220 ribonuclease D 0.67 DDA3937_RS19360 FKBP-type peptidyl-prolyl cis-trans isomerase 0.47 57
Serratia liquefaciens MT49 0.68 IAI46_14530 ribonuclease D 0.68 IAI46_23495 FKBP-type peptidyl-prolyl cis-trans isomerase low > 86
Rahnella sp. WP5 0.68 EX31_RS10595 ribonuclease D 0.66 EX31_RS04475 FKBP-type peptidyl-prolyl cis-trans isomerase 0.51 69
Pectobacterium carotovorum WPP14 0.68 HER17_RS11270 ribonuclease D 0.73 HER17_RS01975 FKBP-type peptidyl-prolyl cis-trans isomerase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS11255 ribonuclease D 0.68 HGI48_RS19490 FKBP-type peptidyl-prolyl cis-trans isomerase low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS11600 ribonuclease D 0.68 DZA65_RS20580 FKBP-type peptidyl-prolyl cis-trans isomerase low > 75
Pantoea sp. MT58 0.66 IAI47_08840 ribonuclease D 0.72 IAI47_02050 FKBP-type peptidyl-prolyl cis-trans isomerase low > 76
Erwinia tracheiphila SCR3 0.64 LU632_RS13130 rnd ribonuclease D 0.71 LU632_RS22715 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase low > 74
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_09900 ribonuclease D 0.42 CSW01_01870 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA low > 62
Shewanella loihica PV-4 0.38 Shew_2187 ribonuclease D (RefSeq) 0.34 Shew_0840 peptidylprolyl isomerase, FKBP-type (RefSeq) low > 60
Shewanella sp. ANA-3 0.36 Shewana3_2385 ribonuclease D (RefSeq) 0.36 Shewana3_0903 peptidylprolyl isomerase, FKBP-type (RefSeq) low > 73
Shewanella oneidensis MR-1 0.36 SO2580 rnd ribonuclease D (NCBI ptt file) 0.37 SO1065 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.36 MIT1002_02587 Ribonuclease D 0.38 MIT1002_04007 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor low > 70
Shewanella amazonensis SB2B 0.35 Sama_1933 ribonuclease D (RefSeq) 0.34 Sama_0642 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1574 ribonuclease D 0.35 B158DRAFT_0679 FKBP-type peptidyl-prolyl cis-trans isomerases 1 low > 40
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS07350 ribonuclease D 0.25 ABZR86_RS07215 FKBP-type peptidyl-prolyl cis-trans isomerase low > 74
Rhodanobacter denitrificans MT42 0.18 LRK55_RS15770 ribonuclease D 0.26 LRK55_RS14885 FKBP-type peptidyl-prolyl cis-trans isomerase low > 63
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS16010 ribonuclease D 0.26 LRK54_RS15170 FKBP-type peptidyl-prolyl cis-trans isomerase low > 59
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_08985 Ribonuclease D 0.26 OKGIIK_07935 fkpA peptidylprolyl isomerase — —

Not shown: 31 genomes with orthologs for ECD_01774 only; 0 genomes with orthologs for ECD_03198 only