Conservation of cofitness between ECD_01118 and ECD_03127 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 1.0 ECD_03127 putative amino acid ABC transporter permease 0.59 23
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02546 NAD-dependent protein deacylase 0.99 OHPLBJKB_00435 hypothetical protein low > 73
Escherichia coli ECOR27 0.98 NOLOHH_20965 cobB NAD-dependent protein deacylase 1.00 NOLOHH_09420 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 75
Escherichia coli ECRC62 0.98 BNILDI_19130 cobB NAD-dependent protein deacylase 1.00 BNILDI_02100 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 75
Escherichia coli ECRC102 0.98 NIAGMN_24390 cobB NAD-dependent protein deacylase 1.00 NIAGMN_15390 yhdX Putative amino-acid ABC transporter permease protein YhdX
Escherichia coli ECOR38 0.98 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.99 HEPCGN_16450 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 87
Escherichia coli ECRC100 0.98 OKFHMN_03440 cobB NAD-dependent protein deacylase 1.00 OKFHMN_17630 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 80
Escherichia coli ECRC99 0.98 KEDOAH_24315 cobB NAD-dependent protein deacylase 1.00 KEDOAH_10520 yhdX Putative amino-acid ABC transporter permease protein YhdX
Escherichia coli ECRC101 0.98 MCAODC_22800 cobB NAD-dependent protein deacylase 1.00 MCAODC_08150 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 87
Escherichia coli ECRC98 0.98 JDDGAC_07100 cobB NAD-dependent protein deacylase 1.00 JDDGAC_21255 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 86
Escherichia fergusonii Becca 0.98 EFB2_02855 NAD-dependent protein deacylase 0.98 EFB2_00554 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.98 ECOLIN_RS18780 amino acid ABC transporter permease
Escherichia coli BW25113 0.87 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 1.00 b3269 yhdX predicted amino-acid transporter subunit (NCBI) low > 76
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.89 EX28DRAFT_3322 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01801 NAD-dependent protein deacylase 0.89 MPMX20_04178 hypothetical protein low > 85
Pantoea sp. MT58 0.75 IAI47_11950 NAD-dependent protein deacylase 0.78 IAI47_02370 amino acid ABC transporter permease low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS08800 NAD-dependent protein deacylase 0.75 HER17_RS20295 amino acid ABC transporter permease low > 75
Rahnella sp. WP5 0.72 EX31_RS24540 NAD-dependent protein deacylase 0.79 EX31_RS12150 amino acid ABC transporter permease low > 89
Dickeya dianthicola ME23 0.71 DZA65_RS13510 NAD-dependent protein deacylase 0.73 DZA65_RS01295 amino acid ABC transporter permease low > 75
Erwinia tracheiphila SCR3 0.70 LU632_RS14640 cobB NAD-dependent protein deacylase 0.76 LU632_RS19775 amino acid ABC transporter permease low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS13045 NAD-dependent protein deacylase 0.73 HGI48_RS01250 amino acid ABC transporter permease low > 71
Dickeya dadantii 3937 0.70 DDA3937_RS12975 NAD-dependent protein deacylase 0.72 DDA3937_RS01265 amino acid ABC transporter permease low > 74
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_07575 NAD-dependent protein deacylase 0.50 CSW01_06850 amino acid ABC transporter permease low > 62
Rhodospirillum rubrum S1H 0.49 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 0.51 Rru_A1003 Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) low > 58
Azospirillum brasilense Sp245 0.47 AZOBR_RS00620 NAD-dependent deacetylase 0.51 AZOBR_RS08660 ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.46 MPMX19_02648 NAD-dependent protein deacylase 0.48 MPMX19_01337 hypothetical protein low > 112
Dinoroseobacter shibae DFL-12 0.35 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.34 Dshi_0319 polar amino acid ABC transporter, inner membrane subunit (RefSeq) low > 64
Variovorax sp. SCN45 0.28 GFF3139 NAD-dependent protein deacetylase of SIR2 family 0.27 GFF1304 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) low > 127
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_23430 NAD-dependent deacetylase 0.60 AO356_17385 amino acid ABC transporter permease low > 104
Pseudomonas sp. S08-1 0.26 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.63 OH686_17810 Amino acid ABC transporter, permease protein 1, YhdX low > 80
Pseudomonas stutzeri RCH2 0.25 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.59 Psest_3162 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 67
Pseudomonas putida KT2440 0.25 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.59 PP_1298 putative amino acid ABC transporter - permease subunit low > 96
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.57 Pf6N2E2_5403 ABC transporter for D-Alanine, permease component 2 (from data) low > 103
Pseudomonas fluorescens SBW25 0.13 PFLU_RS10600 NAD-dependent protein deacetylase 0.60 PFLU_RS04965 amino acid ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS10600 NAD-dependent protein deacetylase 0.60 PFLU_RS04965 amino acid ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.13 AO353_26795 NAD-dependent deacetylase 0.61 AO353_04610 amino acid ABC transporter permease low > 101
Pseudomonas simiae WCS417 0.13 PS417_10540 NAD-dependent deacetylase 0.59 PS417_04905 amino acid ABC transporter permease low > 88

Not shown: 28 genomes with orthologs for ECD_01118 only; 15 genomes with orthologs for ECD_03127 only