Conservation of cofitness between ECD_02953 and ECD_02939 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 1.0 ECD_02939 putative siderophore interacting protein 0.52 10
Escherichia coli ECOR38 1.00 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.98 HEPCGN_17490 nfeF NADPH-dependent ferric chelate reductase low > 87
Escherichia coli BW25113 1.00 b3084 ygjO putative enzyme (VIMSS) 1.00 b3070 yqjH predicted siderophore interacting protein (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 NOLOHH_10430 nfeF NADPH-dependent ferric chelate reductase low > 75
Escherichia coli ECRC62 0.99 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 BNILDI_01085 nfeF NADPH-dependent ferric chelate reductase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.98 ECOLIN_RS17720 NADPH-dependent ferric chelate reductase NfeF — —
Escherichia coli ECRC102 0.99 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 NIAGMN_16405 nfeF NADPH-dependent ferric chelate reductase — —
Escherichia coli ECRC99 0.99 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 KEDOAH_09505 nfeF NADPH-dependent ferric chelate reductase — —
Escherichia coli ECRC98 0.99 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 JDDGAC_22275 nfeF NADPH-dependent ferric chelate reductase low > 86
Escherichia coli ECRC100 0.99 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 OKFHMN_18640 nfeF NADPH-dependent ferric chelate reductase low > 80
Escherichia coli ECRC101 0.99 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 MCAODC_09155 nfeF NADPH-dependent ferric chelate reductase low > 87
Escherichia fergusonii Becca 0.99 EFB2_00728 Ribosomal RNA large subunit methyltransferase G 0.98 EFB2_00741 NADPH-dependent ferric-chelate reductase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G 0.98 OHPLBJKB_00632 NADPH-dependent ferric-chelate reductase low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3153 16S RNA G1207 methylase RsmC 0.72 EX28DRAFT_3136 Siderophore-interacting protein low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G 0.73 MPMX20_03978 NADPH-dependent ferric-chelate reductase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.71 GFF3179 iron-chelator utilization protein low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.70 BWI76_RS24615 siderophore-interacting protein low > 92
Serratia liquefaciens MT49 0.67 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.14 IAI46_15685 siderophore-interacting protein low > 86
Pectobacterium carotovorum WPP14 0.63 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.13 HER17_RS09740 siderophore-interacting protein low > 75
Pantoea sp. MT58 0.62 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.45 IAI47_03495 siderophore-interacting protein low > 76
Dickeya dadantii 3937 0.61 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.15 DDA3937_RS18135 siderophore-interacting protein low > 74
Rahnella sp. WP5 0.58 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.53 EX31_RS00515 siderophore-interacting protein low > 89
Dickeya dianthicola 67-19 0.58 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.15 HGI48_RS18075 siderophore-interacting protein low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.14 DZA65_RS19225 siderophore-interacting protein low > 75
Alteromonas macleodii MIT1002 0.40 MIT1002_00689 Ribosomal RNA large subunit methyltransferase G 0.15 MIT1002_03868 Vibriobactin utilization protein ViuB low > 70
Pseudomonas putida KT2440 0.36 PP_4648 Ribosomal RNA large subunit methyltransferase G 0.26 PP_1056 putative Iron-chelator utilization protein low > 96
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_11685 ribosomal RNA large subunit methyltransferase G 0.16 CSW01_11275 NADPH-dependent ferric siderophore reductase low > 62
Shewanella sp. ANA-3 0.35 Shewana3_0932 methyltransferase small (RefSeq) 0.14 Shewana3_0097 FAD-binding 9, siderophore-interacting domain-containing protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_13950 50S rRNA methyltransferase 0.28 AO353_16065 FAD-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.28 PfGW456L13_4801 iron-chelator utilization protein low > 87
Pseudomonas simiae WCS417 0.34 PS417_24335 50S rRNA methyltransferase 0.27 PS417_05365 FAD-binding protein low > 88
Pseudomonas fluorescens SBW25 0.34 PFLU_RS26260 class I SAM-dependent methyltransferase 0.27 PFLU_RS05405 siderophore-interacting protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS26260 class I SAM-dependent methyltransferase 0.27 PFLU_RS05405 siderophore-interacting protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.27 Psyr_3927 Siderophore-interacting protein low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.27 Psyr_3927 Siderophore-interacting protein low > 86
Pseudomonas sp. RS175 0.33 PFR28_03798 Ribosomal RNA large subunit methyltransferase G 0.24 PFR28_03500 NADPH-dependent ferric-chelate reductase low > 88
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15650 50S rRNA methyltransferase 0.27 AO356_17615 FAD-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.27 Pf6N2E2_5446 iron-chelator utilization protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.28 Pf1N1B4_815 iron-chelator utilization protein low > 87

Not shown: 7 genomes with orthologs for ECD_02953 only; 13 genomes with orthologs for ECD_02939 only