Conservation of cofitness between ECD_02843 and ECD_02888 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02843 glycolate transporter 1.0 ECD_02888 Radical SAM superfamily protein 0.84 9
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00732 Glycolate permease GlcA 1.00 OHPLBJKB_00686 hypothetical protein low > 73
Escherichia coli BW25113 1.00 b2975 yghK glycolate transporter (NCBI) 1.00 b4469 ygiQ hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_18025 glcA glycolate permease GlcA 1.00 HEPCGN_17785 ygiQ YgiQ family radical SAM protein low > 87
Escherichia fergusonii Becca 1.00 EFB2_00840 Glycolate permease GlcA 1.00 EFB2_00795 hypothetical protein low > 86
Escherichia coli ECOR27 1.00 NOLOHH_10950 glcA glycolate permease GlcA 1.00 NOLOHH_10695 ygiQ YgiQ family radical SAM protein low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17115 glycolate permease GlcA 0.99 ECOLIN_RS17355 YgiQ family radical SAM protein low > 55
Escherichia coli ECRC62 1.00 BNILDI_00565 glcA glycolate permease GlcA 1.00 BNILDI_00820 ygiQ YgiQ family radical SAM protein low > 75
Pseudomonas putida KT2440 0.78 PP_4735 L-lactate permease 0.64 PP_4872 putative enzyme of unknown function low > 96
Pseudomonas fluorescens SBW25 0.77 PFLU_RS25945 L-lactate permease 0.64 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS25945 L-lactate permease 0.64 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas simiae WCS417 0.77 PS417_24105 D-lactate transporter (lctP family) (from data) 0.64 PS417_02590 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.76 OH686_17015 L-lactate permease 0.66 OH686_15955 UPF0313 [4Fe-4S] protein YgiQ low > 80
Pseudomonas sp. RS175 0.76 PFR28_00063 Glycolate permease GlcA 0.64 PFR28_05137 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_07550 L-lactate and D-lactate permease (lctP family) (from data) 0.64 AO356_08575 YgiQ family radical SAM protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_05700 L-lactate permease 0.64 AO353_13235 YgiQ family radical SAM protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3380 L-lactate permease 0.64 Pf6N2E2_3600 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 103
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_5114 L-lactate permease 0.64 PfGW456L13_137 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_1186 L-lactate permease 0.63 Pf1N1B4_1396 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Shewanella oneidensis MR-1 0.67 SO0827 lldP propionate/L-lactate/D-lactate transporter (from data) 0.69 SO0311 hypothetical Fe-S oxidoreductase (NCBI ptt file) low > 76
Azospirillum sp. SherDot2 0.44 MPMX19_06091 Glycolate permease GlcA 0.57 MPMX19_06038 hypothetical protein low > 112
Rhodopseudomonas palustris CGA009 0.42 TX73_005835 L-lactate permease 0.57 TX73_003515 YgiQ family radical SAM protein low > 86
Bacteroides thetaiotaomicron VPI-5482 0.23 BT1453 L-lactate permease (NCBI ptt file) 0.32 BT0254 putative Fe-S oxidoreductase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.23 BACOVA_04138 transporter, lactate permease (LctP) family 0.33 BACOVA_00405 putative radical SAM protein YgiQ low > 94
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS17640 L-lactate permease 0.35 HMPREF1058_RS15500 YgiQ family radical SAM protein low > 67
Shewanella sp. ANA-3 0.15 Shewana3_2904 propionate/L-lactate/D-lactate transporter (from data) 0.68 Shewana3_3874 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.15 Sama_2439 L-lactate permease, putative (RefSeq) 0.70 Sama_3349 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.15 Shew_3135 L-lactate permease (RefSeq) 0.70 Shew_0233 hypothetical protein (RefSeq) low > 60
Phocaeicola dorei CL03T12C01 0.13 ABI39_RS13830 L-lactate permease 0.35 ABI39_RS11465 YgiQ family radical SAM protein low > 72

Not shown: 15 genomes with orthologs for ECD_02843 only; 25 genomes with orthologs for ECD_02888 only