Conservation of cofitness between ECD_03303 and ECD_02775 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03303 branched-chain amino acid ABC transporter ATPase 1.0 ECD_02775 DNA-specific endonuclease I low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19755 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 ECOLIN_RS16385 deoxyribonuclease I low > 55
Escherichia coli ECRC101 1.00 MCAODC_07290 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 MCAODC_09805 endA deoxyribonuclease I low > 87
Escherichia coli ECRC99 1.00 KEDOAH_11380 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 KEDOAH_08855 endA deoxyribonuclease I — —
Escherichia coli ECRC102 1.00 NIAGMN_14530 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 NIAGMN_17050 endA deoxyribonuclease I — —
Escherichia coli ECRC62 1.00 BNILDI_02950 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 BNILDI_09735 endA deoxyribonuclease I low > 75
Escherichia coli ECRC100 1.00 OKFHMN_16760 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 OKFHMN_19285 endA deoxyribonuclease I low > 80
Escherichia coli ECRC98 1.00 JDDGAC_20390 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 JDDGAC_22915 endA deoxyribonuclease I low > 86
Escherichia coli ECOR27 1.00 NOLOHH_08555 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 NOLOHH_11155 endA deoxyribonuclease I low > 75
Escherichia fergusonii Becca 1.00 EFB2_00368 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.99 EFB2_00957 Endonuclease-1 low > 86
Escherichia coli BW25113 1.00 b3454 livF ATP-binding component of leucine transport (VIMSS) 1.00 b2945 endA DNA-specific endonuclease I (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_15580 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1.00 HEPCGN_18590 endA deoxyribonuclease I low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00249 High-affinity branched-chain amino acid transport ATP-binding protein LivF 1.00 OHPLBJKB_00773 Endonuclease-1 low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF552 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.85 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) low > 78
Klebsiella michiganensis M5al 0.95 BWI76_RS26330 ABC transporter ATP-binding protein 0.86 BWI76_RS24065 deoxyribonuclease I low > 92
Enterobacter sp. TBS_079 0.95 MPMX20_04330 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.88 MPMX20_03803 Endonuclease-1 low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4286 ABC-type branched-chain amino acid transport systems, ATPase component 0.88 EX28DRAFT_2983 Endonuclease I low > 76
Pectobacterium carotovorum WPP14 0.88 HER17_RS00515 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.76 HER17_RS02645 deoxyribonuclease I low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS20710 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.78 HGI48_RS18485 deoxyribonuclease I low > 71
Dickeya dadantii 3937 0.88 DDA3937_RS00680 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.79 DDA3937_RS18550 deoxyribonuclease I low > 74
Rahnella sp. WP5 0.86 EX31_RS14785 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.76 EX31_RS02655 deoxyribonuclease I low > 89
Pantoea sp. MT58 0.86 IAI47_01585 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.75 IAI47_03625 deoxyribonuclease I low > 76
Serratia liquefaciens MT49 0.79 IAI46_00980 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.73 IAI46_21380 deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3849 L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein 0.48 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3849 L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein 0.48 Psyr_2148 Deoxyribonuclease I low > 86
Pseudomonas stutzeri RCH2 0.65 Psest_1308 ABC-type branched-chain amino acid transport systems, ATPase component 0.47 Psest_1274 Endonuclease I low > 67
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_05340 ABC transporter ATP-binding protein 0.46 AO356_00985 deoxyribonuclease low > 104
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS06625 ABC transporter ATP-binding protein 0.47 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas fluorescens SBW25 0.64 PFLU_RS06625 ABC transporter ATP-binding protein 0.47 PFLU_RS20395 deoxyribonuclease low > 109
Pseudomonas sp. RS175 0.64 PFR28_00536 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.46 PFR28_02739 Extracellular deoxyribonuclease low > 88
Pseudomonas simiae WCS417 0.64 PS417_06595 ABC transporter ATP-binding protein 0.48 PS417_18420 deoxyribonuclease — —
Pseudomonas sp. S08-1 0.64 OH686_04625 Branched-chain amino acid ABC transporter, ATP-binding protein LivF 0.45 OH686_20125 Endonuclease I precursor low > 80
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4611 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.47 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3214 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.46 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_17105 ABC transporter ATP-binding protein 0.46 AO353_20795 deoxyribonuclease low > 101
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2926 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) 0.46 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) low > 103
Shewanella loihica PV-4 0.41 Shew_2606 ABC transporter-related protein (RefSeq) 0.56 Shew_3223 deoxyribonuclease I (RefSeq) low > 60

Not shown: 36 genomes with orthologs for ECD_03303 only; 5 genomes with orthologs for ECD_02775 only