Conservation of cofitness between ECD_02848 and ECD_02591 in Escherichia coli BL21

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02848 glycolate oxidase subunit, FAD-linked 1.0 ECD_02591 RNA polymerase, sigma S (sigma 38) factor low > 61
Escherichia coli ECRC62 1.00 BNILDI_00595 glcD glycolate oxidase subunit GlcD 1.00 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECOR27 1.00 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 1.00 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00727 putative FAD-linked oxidoreductase 1.00 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 73
Escherichia fergusonii Becca 1.00 EFB2_00835 putative FAD-linked oxidoreductase 1.00 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Escherichia coli BW25113 1.00 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 1.00 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 1.00 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 87
Pseudomonas stutzeri RCH2 0.84 Psest_3841 D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.63 Psest_2806 RNA polymerase sigma factor RpoS low > 67
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_5862 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.64 Pf1N1B4_3115 RNA polymerase sigma factor RpoS low > 87
Pseudomonas putida KT2440 0.82 PP_3745 glycolate oxidase, putative FAD-linked subunit 0.64 PP_1623 RNA polymerase, sigma S (sigma 38) factor low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.64 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.64 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas sp. RS175 0.81 PFR28_02758 putative FAD-linked oxidoreductase 0.64 PFR28_00427 RNA polymerase sigma factor RpoS low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_01090 glycolate oxidase subunit GlcD 0.64 AO356_05885 RNA polymerase sigma factor RpoS low > 104
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_21310 glycolate oxidase subunit GlcD 0.64 AO353_16615 RNA polymerase sigma factor RpoS low > 101
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_137 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.64 Pf6N2E2_3037 RNA polymerase sigma factor RpoS low > 103
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS38015 glycolate oxidase subunit GlcD 0.38 QEN71_RS22240 RNA polymerase sigma factor RpoS low > 153
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS19105 FAD-binding protein 0.45 HSERO_RS14830 RNA polymerase sigma factor RpoS low > 78
Dechlorosoma suillum PS 0.60 Dsui_3415 FAD/FMN-dependent dehydrogenase 0.46 Dsui_1971 RNA polymerase sigma factor RpoS low > 51
Marinobacter adhaerens HP15 0.59 HP15_3024 FAD linked oxidase domain protein 0.64 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family low > 73
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04683 glycolate oxidase 0.38 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS
Variovorax sp. OAS795 0.58 ABID97_RS03650 FAD-linked oxidase C-terminal domain-containing protein 0.32 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor low > 91
Variovorax sp. SCN45 0.57 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.34 GFF2842 RNA polymerase sigma factor RpoS low > 127
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_0276 glcD glycolate oxidase subunit GlcD 0.35 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA low > 38
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_13425 FAD-binding oxidoreductase 0.33 CA264_04885 RNA polymerase subunit sigma
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS09620 FAD-binding oxidoreductase 0.31 CA265_RS04285 RNA polymerase sigma factor RpoD
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS06545 FAD-binding oxidoreductase 0.31 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA
Pseudomonas fluorescens SBW25 0.20 PFLU_RS15570 FAD-binding protein 0.64 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS15570 FAD-binding protein 0.64 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_944 D-2-hydroxyglutarate dehydrogenase 0.64 PfGW456L13_4674 RNA polymerase sigma factor RpoS low > 87
Pseudomonas sp. S08-1 0.18 OH686_11285 D-2-hydroxyglutarate dehydrogenase 0.65 OH686_18185 RNA polymerase sigma factor RpoS low > 80
Pseudomonas simiae WCS417 0.17 PS417_27035 FAD-linked oxidase 0.64 PS417_06365 RNA polymerase sigma factor low > 88

Not shown: 39 genomes with orthologs for ECD_02848 only; 23 genomes with orthologs for ECD_02591 only