Conservation of cofitness between ECD_01634 and ECD_02519 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01634 multidrug efflux system transporter 1.0 ECD_02519 gamma-aminobutyrate transporter 0.61 6
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02061 Multidrug resistance protein MdtK 1.00 OHPLBJKB_01069 GABA permease low > 73
Escherichia fergusonii Becca 1.00 EFB2_02329 Multidrug resistance protein MdtK 1.00 EFB2_01267 GABA permease low > 86
Escherichia coli BW25113 1.00 b1663 mdtK multidrug efflux protein NorM (NCBI) 1.00 b2663 gabP gamma-aminobutyrate transporter (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK 1.00 NOLOHH_12730 gabP GABA permease — —
Escherichia coli ECRC62 1.00 BNILDI_16670 mdtK multidrug efflux MATE transporter MdtK 1.00 BNILDI_11290 gabP GABA permease — —
Escherichia coli ECOR38 1.00 HEPCGN_05745 mdtK multidrug efflux MATE transporter MdtK 1.00 HEPCGN_20160 gabP GABA permease 0.65 62
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK 1.00 ECOLIN_RS14850 GABA permease — —
Escherichia coli ECRC98 1.00 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK 1.00 JDDGAC_24565 gabP GABA permease — —
Escherichia coli ECRC101 1.00 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK 1.00 MCAODC_11425 gabP GABA permease — —
Escherichia coli ECRC101 1.00 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK 1.00 OKFHMN_20905 gabP GABA permease — —
Escherichia coli ECRC102 1.00 NIAGMN_00705 mdtK multidrug efflux MATE transporter MdtK 1.00 NIAGMN_18670 gabP GABA permease — —
Escherichia coli ECRC99 1.00 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK 1.00 KEDOAH_07235 gabP GABA permease — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.92 GFF1568 gamma-aminobutyrate (GABA) permease low > 78
Pantoea sp. MT58 0.76 IAI47_10820 MATE family efflux transporter 0.61 IAI47_19470 GABA permease low > 76
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_00550 MATE family efflux transporter 0.64 AO353_12005 GABA permease low > 101
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4049 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.64 PfGW456L13_375 transport permease protein of gamma-aminobutyrate low > 87
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS07610 MATE family efflux transporter 0.65 PFLU_RS01545 GABA permease low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS07610 MATE family efflux transporter 0.65 PFLU_RS01545 GABA permease low > 109
Pseudomonas simiae WCS417 0.41 PS417_07530 multidrug transporter 0.66 PS417_01505 gamma-aminobutyrate transporter low > 88
Pseudomonas sp. RS175 0.41 PFR28_01102 Multidrug resistance protein NorM 0.62 PFR28_04595 GABA permease low > 88
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3892 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.62 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate low > 87
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2298 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.62 Pf6N2E2_4195 transport permease protein of gamma-aminobutyrate low > 103
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_02370 MATE family efflux transporter 0.62 AO356_11625 GABA permease low > 104
Acinetobacter radioresistens SK82 0.30 MPMX26_00306 Multidrug resistance protein NorM 0.51 MPMX26_01988 GABA permease low > 36
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.4760.1 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM 0.32 Xcc-8004.1650.1 amino acid transporter low > 74
Lysobacter sp. OAE881 0.23 ABIE51_RS02170 MATE family efflux transporter 0.33 ABIE51_RS01430 amino acid permease low > 62
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS13335 multidrug transporter MatE 0.41 RR42_RS33780 GABA permease low > 128
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS09015 multidrug transporter MatE 0.42 BPHYT_RS21680 amino acid permease-associated protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_00822 multidrug resistance protein, MATE family 0.33 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family low > 103
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS04380 MATE family efflux transporter 0.50 QEN71_RS31450 amino acid permease low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_0073 Multi antimicrobial extrusion protein MatE 0.66 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family low > 86
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_0073 Multi antimicrobial extrusion protein MatE 0.66 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family low > 86
Pseudomonas putida KT2440 0.19 PP_5262 Probable multidrug resistance protein NorM 0.68 PP_2911 gamma-aminobutyrate permease low > 96

Not shown: 59 genomes with orthologs for ECD_01634 only; 1 genomes with orthologs for ECD_02519 only