Conservation of cofitness between ECD_02979 and ECD_02401 in Escherichia coli BL21

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02979 L-serine dehydratase 3, anaerobic 1.0 ECD_02401 exonuclease VII, large subunit 0.43 10
Escherichia coli BW25113 1.00 b4471 tdcG L-serine dehydratase 3 (NCBI) 1.00 b2509 xseA exodeoxyribonuclease VII large subunit (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_17260 tdcG L-serine ammonia-lyase 0.92 HEPCGN_20895 xseA exodeoxyribonuclease VII large subunit low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00588 L-serine dehydratase TdcG 0.99 OHPLBJKB_01200 Exodeoxyribonuclease 7 large subunit low > 73
Escherichia coli ECRC62 1.00 BNILDI_01320 tdcG L-serine ammonia-lyase 0.99 BNILDI_12205 xseA exodeoxyribonuclease VII large subunit low > 75
Escherichia coli ECOR27 1.00 NOLOHH_10205 tdcG L-serine ammonia-lyase 0.99 NOLOHH_13405 xseA exodeoxyribonuclease VII large subunit low > 75
Escherichia coli ECRC101 0.99 MCAODC_08940 tdcG L-serine ammonia-lyase 0.98 MCAODC_12285 xseA exodeoxyribonuclease VII large subunit low > 87
Escherichia fergusonii Becca 0.99 EFB2_00702 L-serine dehydratase TdcG 0.90 EFB2_01384 Exodeoxyribonuclease 7 large subunit low > 86
Escherichia coli ECRC98 0.99 JDDGAC_22060 tdcG L-serine ammonia-lyase 0.98 JDDGAC_25430 xseA exodeoxyribonuclease VII large subunit low > 86
Escherichia coli ECRC99 0.99 KEDOAH_09720 tdcG L-serine ammonia-lyase 0.98 KEDOAH_06465 xseA exodeoxyribonuclease VII large subunit
Escherichia coli ECRC102 0.99 NIAGMN_16190 tdcG L-serine ammonia-lyase 0.98 NIAGMN_19525 xseA exodeoxyribonuclease VII large subunit
Escherichia coli ECRC100 0.99 OKFHMN_18425 tdcG L-serine ammonia-lyase 0.98 OKFHMN_21755 xseA exodeoxyribonuclease VII large subunit low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17915 L-serine ammonia-lyase 0.91 ECOLIN_RS14245 exodeoxyribonuclease VII large subunit low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3206 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.87 GFF2159 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1339 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.41 B158DRAFT_1157 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 40
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1601.1 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.37 Xcc-8004.2251.1 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 74
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19060 L-serine ammonia-lyase 0.41 ABZR86_RS06815 exodeoxyribonuclease VII large subunit low > 74
Rhodanobacter denitrificans MT42 0.52 LRK55_RS05035 L-serine ammonia-lyase 0.41 LRK55_RS17410 exodeoxyribonuclease VII large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS05255 L-serine ammonia-lyase 0.40 LRK54_RS17185 exodeoxyribonuclease VII large subunit low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_01565 sdaA L-serine ammonia-lyase 0.40 OKGIIK_07700 xseA exodeoxyribonuclease VII large subunit low > 52
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_03505 serine dehydratase 0.38 AO353_15935 exodeoxyribonuclease low > 101
Pseudomonas stutzeri RCH2 0.51 Psest_0784 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.39 Psest_1284 exodeoxyribonuclease VII, large subunit low > 67
Lysobacter sp. OAE881 0.51 ABIE51_RS16145 L-serine ammonia-lyase 0.36 ABIE51_RS13750 exodeoxyribonuclease VII large subunit low > 62
Pseudomonas putida KT2440 0.50 PP_0987 L-serine dehydratase 0.37 PP_1027 Exodeoxyribonuclease 7 large subunit low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3522 L-serine ammonia-lyase 0.38 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3522 L-serine ammonia-lyase 0.38 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Variovorax sp. SCN45 0.46 GFF3439 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.33 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 127
Phaeobacter inhibens DSM 17395 0.42 PGA1_c23770 L-serine dehydratase TdcG 0.27 PGA1_c23600 exodeoxyribonuclease 7 large subunit low > 62
Azospirillum sp. SherDot2 0.41 MPMX19_04703 L-serine dehydratase TdcG 0.26 MPMX19_01631 Exodeoxyribonuclease 7 large subunit low > 112
Bacteroides thetaiotaomicron VPI-5482 0.31 BT4678 L-serine dehydratase (NCBI ptt file) 0.14 BT3890 putative exodeoxyribonuclease VII large subunit (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.30 BACOVA_05536 L-serine ammonia-lyase 0.13 BACOVA_01111 Exonuclease VII, large subunit low > 94
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12245 L-serine ammonia-lyase 0.14 ABI39_RS01425 exodeoxyribonuclease VII large subunit low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS16410 L-serine ammonia-lyase 0.14 HMPREF1058_RS02230 exodeoxyribonuclease VII large subunit low > 67
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS11755 L-serine ammonia-lyase 0.12 HMPREF1181_RS06920 exodeoxyribonuclease VII large subunit low > 56
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01410 L-serine ammonia-lyase 0.15 HMPREF1078_RS12780 exodeoxyribonuclease VII large subunit low > 61

Not shown: 0 genomes with orthologs for ECD_02979 only; 62 genomes with orthologs for ECD_02401 only