Conservation of cofitness between ECD_02630 and ECD_02208 in Escherichia coli BL21

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 1.0 ECD_02208 NADH:ubiquinone oxidoreductase, chain G 0.54 10
Escherichia coli BW25113 1.00 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 1.00 b2283 nuoG NADH:ubiquinone oxidoreductase, chain G (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 OHPLBJKB_01423 NADH-quinone oxidoreductase subunit G low > 73
Escherichia coli ECRC62 0.99 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 BNILDI_13405 nuoG NADH-quinone oxidoreductase subunit NuoG low > 75
Escherichia coli ECOR27 0.99 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 NOLOHH_14485 nuoG NADH-quinone oxidoreductase subunit NuoG low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.99 ECOLIN_RS13260 NADH-quinone oxidoreductase subunit NuoG low > 55
Escherichia coli ECRC98 0.99 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 JDDGAC_26830 nuoG NADH-quinone oxidoreductase subunit NuoG low > 86
Escherichia coli ECRC101 0.99 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 MCAODC_13905 nuoG NADH-quinone oxidoreductase subunit NuoG low > 87
Escherichia coli ECRC100 0.99 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 OKFHMN_22865 nuoG NADH-quinone oxidoreductase subunit NuoG low > 80
Escherichia coli ECRC102 0.99 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 NIAGMN_20635 nuoG NADH-quinone oxidoreductase subunit NuoG — —
Escherichia coli ECRC99 0.99 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 KEDOAH_05330 nuoG NADH-quinone oxidoreductase subunit NuoG — —
Escherichia coli ECOR38 0.98 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 HEPCGN_22070 nuoG NADH-quinone oxidoreductase subunit NuoG low > 87
Escherichia fergusonii Becca 0.98 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.00 EFB2_01576 NADH-quinone oxidoreductase subunit G low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.94 GFF1886 NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.92 EX28DRAFT_0327 NADH-quinone oxidoreductase, chain G low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.92 MPMX20_03213 NADH-quinone oxidoreductase subunit G low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.92 BWI76_RS20165 NADH-quinone oxidoreductase subunit G low > 92
Dickeya dianthicola ME23 0.66 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.82 DZA65_RS14960 NADH-quinone oxidoreductase subunit NuoG — —
Dickeya dianthicola 67-19 0.66 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.82 HGI48_RS14285 NADH-quinone oxidoreductase subunit NuoG low > 71
Dickeya dadantii 3937 0.65 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.82 DDA3937_RS14310 NADH-quinone oxidoreductase subunit NuoG — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.82 HER17_RS07150 NADH-quinone oxidoreductase subunit NuoG low > 75
Pantoea sp. MT58 0.64 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.82 IAI47_06385 NADH-quinone oxidoreductase subunit NuoG low > 76
Serratia liquefaciens MT49 0.63 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.81 IAI46_17685 NADH-quinone oxidoreductase subunit NuoG low > 86
Rahnella sp. WP5 0.62 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.80 EX31_RS19410 NADH-quinone oxidoreductase subunit NuoG low > 89
Erwinia tracheiphila SCR3 0.59 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.84 LU632_RS07990 nuoG NADH-quinone oxidoreductase subunit NuoG low > 74
Shewanella oneidensis MR-1 0.43 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) 0.64 SO1016 nuoG NADH dehydrogenase I, G subunit (NCBI ptt file) low > 76
Acinetobacter radioresistens SK82 0.34 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.58 MPMX26_02550 NADH-quinone oxidoreductase subunit G — —
Pseudomonas simiae WCS417 0.34 PS417_20155 23S rRNA methyltransferase 0.66 PS417_16600 NADH dehydrogenase — —
Pseudomonas sp. S08-1 0.33 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.64 OH686_00130 NADH dehydrogenase (quinone), G subunit low > 80
Pseudomonas fluorescens SBW25 0.33 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.65 PFLU_RS18640 NADH-quinone oxidoreductase subunit NuoG low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.65 PFLU_RS18640 NADH-quinone oxidoreductase subunit NuoG low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.67 Psyr_3202 NADH dehydrogenase subunit G — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.67 Psyr_3202 NADH dehydrogenase subunit G low > 86
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.57 Pf1N1B4_4035 NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) low > 87
Pseudomonas sp. RS175 0.32 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.66 PFR28_02632 NADH-quinone oxidoreductase subunit G — —
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_19055 23S rRNA methyltransferase 0.66 AO356_22045 NADH dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.66 Pf6N2E2_272 NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) — —
Pseudomonas putida KT2440 0.30 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.65 PP_4124 NADH-quinone oxidoreductase subunit G low > 96
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_02715 23S rRNA methyltransferase 0.66 AO353_27765 NADH dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.65 PfGW456L13_2628 NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_02005 23S rRNA (uracil-5-)-methyltransferase RumA 0.50 CA264_04245 NADH-quinone oxidoreductase subunit G low > 74
Rhodopseudomonas palustris CGA009 0.15 TX73_004885 methyltransferase 0.36 TX73_022065 NADH-quinone oxidoreductase subunit NuoG 0.25 16

Not shown: 55 genomes with orthologs for ECD_02630 only; 0 genomes with orthologs for ECD_02208 only