Conservation of cofitness between ECD_00008 and ECD_02182 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00008 transaldolase B 1.0 ECD_02182 undecaprenyl phosphate-alpha-L-ara4FN deformylase 0.55 21
Escherichia coli ECOR27 1.00 NOLOHH_03410 transaldolase B 1.00 NOLOHH_14605 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03652 Transaldolase 1.00 OHPLBJKB_01455 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 73
Escherichia coli BW25113 1.00 b0008 talB transaldolase B (NCBI) 1.00 b2256 yfbH hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_08195 transaldolase B 1.00 BNILDI_13520 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 75
Escherichia coli ECRC98 1.00 JDDGAC_14675 transaldolase B 1.00 JDDGAC_26945 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 86
Escherichia coli ECRC102 1.00 NIAGMN_08930 transaldolase B 1.00 NIAGMN_20750 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase — —
Escherichia coli ECRC99 1.00 KEDOAH_17075 transaldolase B 1.00 KEDOAH_05215 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase — —
Escherichia coli ECRC101 1.00 MCAODC_01595 transaldolase B 1.00 MCAODC_14020 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_11080 transaldolase B 1.00 OKFHMN_22980 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase low > 80
Escherichia fergusonii Becca 1.00 EFB2_04035 Transaldolase B 0.98 EFB2_01600 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 86
Escherichia coli ECOR38 1.00 HEPCGN_09085 transaldolase B 0.98 HEPCGN_22195 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase 0.73 27
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00045 transaldolase 0.98 ECOLIN_RS13140 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Klebsiella michiganensis M5al 0.96 BWI76_RS04270 transaldolase 0.68 BWI76_RS26470 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1083 Transaldolase (EC 2.2.1.2) 0.74 GFF1861 Polymyxin resistance protein PmrJ, predicted deacetylase low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00716 Transaldolase B 0.70 MPMX20_04377 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD low > 85
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3620 transaldolase 0.72 EX28DRAFT_4085 Predicted xylanase/chitin deacetylase low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02815 transaldolase 0.59 HER17_RS06535 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 75
Dickeya dianthicola ME23 0.92 DZA65_RS19465 transaldolase 0.66 DZA65_RS22625 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 75
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.66 DDA3937_RS21375 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 74
Serratia liquefaciens MT49 0.91 IAI46_03055 transaldolase 0.62 IAI46_11030 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 86
Dickeya dianthicola 67-19 0.91 HGI48_RS18325 transaldolase 0.65 HGI48_RS21640 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 71
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.64 IAI47_21610 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 76
Rahnella sp. WP5 0.90 EX31_RS03920 transaldolase 0.63 EX31_RS14005 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 89
Erwinia tracheiphila SCR3 0.88 LU632_RS02630 tal transaldolase 0.67 LU632_RS16480 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 74
Pseudomonas simiae WCS417 0.61 PS417_07730 transaldolase 0.60 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase — —
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS07805 transaldolase 0.59 PFLU_RS14820 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS07805 transaldolase 0.59 PFLU_RS14820 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase low > 109
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_00310 transaldolase 0.59 AO353_25545 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1914 transaldolase 0.60 Psyr_2692 Polysaccharide deacetylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1914 transaldolase 0.60 Psyr_2692 Polysaccharide deacetylase low > 86
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS05500 transaldolase 0.24 HSERO_RS10415 xylanase — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS11000 transaldolase 0.27 ABZR87_RS11400 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase — —
Paraburkholderia graminis OAS925 0.51 ABIE53_001416 transaldolase 0.26 ABIE53_002016 undecaprenyl phosphate-alpha-L-ara4FN deformylase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00286 transaldolase 0.28 H281DRAFT_00801 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS24595 transaldolase 0.28 QEN71_RS22450 polysaccharide deacetylase family protein — —
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS06045 transaldolase 0.28 BPHYT_RS08910 polysaccharide deacetylase — —

Not shown: 25 genomes with orthologs for ECD_00008 only; 6 genomes with orthologs for ECD_02182 only