Conservation of cofitness between ECD_03421 and ECD_01981 in Escherichia coli BL21

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03421 xylose divergent operon transcriptional activator 1.0 ECD_01981 multidrug efflux system, subunit C 0.50 7
Escherichia coli ECRC102 1.00 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC — —
Escherichia coli ECRC100 1.00 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC low > 80
Escherichia coli BW25113 1.00 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 1.00 b2076 mdtC multidrug efflux system, subunit C (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00135 Xylose operon regulatory protein 1.00 OHPLBJKB_01628 Multidrug resistance protein MdtC low > 73
Escherichia coli ECOR27 1.00 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC low > 75
Escherichia coli ECOR38 1.00 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC low > 87
Escherichia coli ECRC62 1.00 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC low > 75
Escherichia coli ECRC98 1.00 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR 1.00 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC low > 86
Escherichia coli ECRC101 1.00 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC low > 87
Escherichia coli ECRC99 1.00 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC — —
Escherichia fergusonii Becca 1.00 EFB2_00238 Xylose operon regulatory protein 0.99 EFB2_01779 Multidrug resistance protein MdtC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF442 Xylose activator XylR (AraC family) 0.90 GFF3853 Multidrug transporter MdtC low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3834 Transcriptional regulators 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_00161 Xylose operon regulatory protein 0.92 MPMX20_03062 Multidrug resistance protein MdtC low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS27045 XylR family transcriptional regulator 0.90 BWI76_RS19260 multidrug transporter subunit MdtC low > 92
Pantoea sp. MT58 0.84 IAI47_00175 XylR family transcriptional regulator 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC low > 76
Rahnella sp. WP5 0.84 EX31_RS09745 XylR family transcriptional regulator 0.53 EX31_RS13375 MMPL family transporter low > 89
Serratia liquefaciens MT49 0.82 IAI46_00300 DNA-binding transcriptional regulator 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS21065 XylR family transcriptional regulator 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS00330 XylR family transcriptional regulator 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS00330 DNA-binding transcriptional regulator 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS20915 DNA-binding transcriptional regulator 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC low > 74
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS25880 DNA-binding transcriptional regulator 0.48 QEN71_RS29845 efflux RND transporter permease subunit low > 153
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_03875 transcriptional regulator, AraC family 0.45 H281DRAFT_06491 multidrug efflux pump low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS32830 AraC family transcriptional regulator 0.43 BPHYT_RS07780 nodulation protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_2882 transcriptional regulator, AraC family 0.53 Psyr_2484 Acriflavin resistance protein low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_2882 transcriptional regulator, AraC family 0.53 Psyr_2484 Acriflavin resistance protein low > 86
Pseudomonas simiae WCS417 0.45 PS417_10950 AraC family transcriptional regulator 0.52 PS417_12750 acriflavine resistance protein B low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_28495 AraC family transcriptional regulator 0.51 AO356_25880 acriflavine resistance protein B low > 104
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS22455 AraC family transcriptional regulator 0.61 HSERO_RS07655 nodulation protein low > 78
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS18215 DNA-binding transcriptional regulator 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit low > 80
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_1453 Xylose activator XylR (AraC family) 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein low > 103
Pseudomonas sp. RS175 0.44 PFR28_02347 Xylose operon regulatory protein 0.51 PFR28_02193 Multidrug resistance protein MdtC low > 88
Pseudomonas fluorescens SBW25 0.43 PFLU_RS11310 DNA-binding transcriptional regulator 0.53 PFLU_RS13435 MMPL family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS11310 DNA-binding transcriptional regulator 0.53 PFLU_RS13435 MMPL family transporter low > 109

Not shown: 5 genomes with orthologs for ECD_03421 only; 24 genomes with orthologs for ECD_01981 only