| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_00419 | | DUF454 family inner membrane protein | 1.0 | ECD_01619 | | transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated | 0.59 | 1 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_11825 | ybaN | DUF454 domain-containing protein | 0.97 | JDDGAC_02030 | nemR | DNA-binding transcriptional regulator NemR | low | > 86 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_19790 | ybaN | DUF454 domain-containing protein | 0.97 | KEDOAH_00670 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli BW25113 | 1.00 | b0468 | ybaN | conserved inner membrane protein (NCBI) | 1.00 | b1649 | ydhM | predicted DNA-binding transcriptional regulator (RefSeq) | — | — |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_08175 | ybaN | DUF454 domain-containing protein | 0.97 | OKFHMN_27440 | nemR | DNA-binding transcriptional regulator NemR | low | > 80 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_22525 | ybaN | DUF454 domain-containing protein | 1.00 | BNILDI_16750 | nemR | DNA-binding transcriptional regulator NemR | low | > 75 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_01105 | ybaN | DUF454 domain-containing protein | 1.00 | NOLOHH_17960 | nemR | DNA-binding transcriptional regulator NemR | low | > 75 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_06790 | ybaN | DUF454 domain-containing protein | 0.98 | HEPCGN_05825 | nemR | DNA-binding transcriptional regulator NemR | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03206 | | Inner membrane protein YbaN | 1.00 | OHPLBJKB_02076 | | HTH-type transcriptional repressor NemR | low | > 73 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_06230 | ybaN | DUF454 domain-containing protein | 0.97 | NIAGMN_00625 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS02785 | | DUF454 family protein | 1.00 | ECOLIN_RS09195 | | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli ECRC101 | 0.99 | MCAODC_27400 | ybaN | DUF454 domain-containing protein | 0.98 | MCAODC_17970 | nemR | DNA-binding transcriptional regulator NemR | low | > 87 |
| Escherichia fergusonii Becca | 0.99 | EFB2_03590 | | Inner membrane protein YbaN | 1.00 | EFB2_02343 | | HTH-type transcriptional repressor NemR | low | > 86 |
| Enterobacter sp. TBS_079 | 0.80 | MPMX20_01070 | | Inner membrane protein YbaN | 0.83 | MPMX20_01987 | | HTH-type transcriptional repressor NemR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_2490 | | Uncharacterized protein conserved in bacteria | 0.84 | EX28DRAFT_1647 | | transcriptional regulator, TetR family | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF4386 | | FIG039061: hypothetical protein related to heme utilization | 0.83 | GFF3625 | | Transcriptional regulator, TetR family | low | > 78 |
| Klebsiella michiganensis M5al | 0.74 | BWI76_RS06810 | | hypothetical protein | 0.74 | BWI76_RS16470 | | transcriptional repressor NemR | low | > 92 |
| Rahnella sp. WP5 | 0.62 | EX31_RS22500 | | DUF454 family protein | 0.36 | EX31_RS01435 | | TetR/AcrR family transcriptional regulator | low | > 89 |
| Pantoea sp. MT58 | 0.62 | IAI47_14485 | | DUF454 family protein | 0.48 | IAI47_10760 | | TetR/AcrR family transcriptional regulator | low | > 76 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_05220 | | DUF454 family protein | 0.47 | IAI46_11285 | | TetR/AcrR family transcriptional regulator | low | > 86 |
| Shewanella amazonensis SB2B | 0.46 | Sama_1308 | | hypothetical protein (RefSeq) | 0.38 | Sama_0476 | | TetR family transcriptional regulator (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.45 | SO2011 | | conserved hypothetical protein (NCBI ptt file) | 0.35 | SO4468 | | transcriptional regulator, TetR family (NCBI ptt file) | low | > 76 |
| Pseudomonas syringae pv. syringae B728a | 0.40 | Psyr_3740 | | Protein of unknown function DUF454 | 0.34 | Psyr_2933 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.40 | Psyr_3740 | | Protein of unknown function DUF454 | 0.34 | Psyr_2933 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS21930 | | DUF454 domain-containing protein | 0.36 | PFLU_RS11765 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS21930 | | DUF454 domain-containing protein | 0.36 | PFLU_RS11765 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_19960 | | membrane protein | 0.36 | PS417_11180 | | TetR family transcriptional regulator | low | > 88 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_2448 | | hypothetical protein (RefSeq) | 0.34 | Shewana3_0262 | | TetR family transcriptional regulator (RefSeq) | low | > 73 |
| Pseudomonas putida KT2440 | 0.37 | PP_4518 | | conserved protein of unknown function | 0.41 | PP_2475 | | Transcriptional regulator, TetR family | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_1866 | | Uncharacterized protein conserved in bacteria | 0.21 | Psest_0932 | | Transcriptional regulator | low | > 67 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.36 | GFF2586 | | FIG039061: hypothetical protein related to heme utilization | 0.16 | GFF2489 | | Transcriptional regulator, TetR family | low | > 90 |
| Pseudomonas sp. S08-1 | 0.35 | OH686_20660 | | Inner membrane protein YbaN | 0.24 | OH686_06240 | | Transcriptional regulator, AcrR family | low | > 80 |
| Phaeobacter inhibens DSM 17395 | 0.28 | PGA1_c35060 | | inner membrane protein | 0.36 | PGA1_c30430 | | transcriptional regulator, TetR family | low | > 62 |
| Variovorax sp. SCN45 | 0.27 | GFF5173 | | Hypothetical protein DUF454 | 0.23 | GFF4224 | | Transcriptional regulator, AcrR family | — | — |
| Herbaspirillum seropedicae SmR1 | 0.25 | HSERO_RS22710 | | hypothetical protein | 0.33 | HSERO_RS18905 | | TetR family transcriptional regulator | low | > 78 |
| Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02504 | | Inner membrane protein YbaN | 0.36 | MPMX26_00888 | | HTH-type transcriptional repressor NemR | low | > 36 |
Not shown: 24 genomes with orthologs for ECD_00419 only; 16 genomes with orthologs for ECD_01619 only