Conservation of cofitness between ECD_00617 and ECD_01043 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00617 ribonucleoside hydrolase 1 1.0 ECD_01043 stationary phase cardiolipin synthase 3 0.63 13
Escherichia coli BW25113 1.00 b0651 rihA ribonucleoside hydrolase 1 (NCBI) 1.00 b1046 ymdC putative synthase (VIMSS) low > 76
Escherichia coli ECRC101 1.00 OKFHMN_07275 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OKFHMN_03810 clsC cardiolipin synthase ClsC — —
Escherichia coli ECRC99 1.00 KEDOAH_20695 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 KEDOAH_23945 clsC cardiolipin synthase ClsC — —
Escherichia coli ECRC102 1.00 NIAGMN_05330 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NIAGMN_24020 clsC cardiolipin synthase ClsC — —
Escherichia coli ECRC101 1.00 MCAODC_26490 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 MCAODC_23170 clsC cardiolipin synthase ClsC — —
Escherichia coli ECRC98 1.00 JDDGAC_10920 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 JDDGAC_07470 clsC cardiolipin synthase ClsC — —
Escherichia coli ECRC62 0.99 BNILDI_21670 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 BNILDI_19500 clsC cardiolipin synthase ClsC — —
Escherichia coli ECOR27 0.99 NOLOHH_23660 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NOLOHH_21340 clsC cardiolipin synthase ClsC low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03062 Pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OHPLBJKB_02618 Cardiolipin synthase C low > 73
Escherichia coli ECOR38 0.99 HEPCGN_00955 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.99 HEPCGN_23680 clsC cardiolipin synthase ClsC low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03505 pyrimidine-specific ribonucleoside hydrolase RihA 0.99 ECOLIN_RS06070 cardiolipin synthase ClsC low > 52
Escherichia fergusonii Becca 0.99 EFB2_03448 Pyrimidine-specific ribonucleoside hydrolase RihA 1.00 EFB2_02927 Cardiolipin synthase C low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4569 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.78 GFF3326 Cardiolipin synthetase (EC 2.7.8.-) low > 78
Shewanella loihica PV-4 0.74 Shew_0697 rihA ribonucleoside hydrolase 1 (RefSeq) 0.36 Shew_1456 phospholipase D/transphosphatidylase (RefSeq) low > 60
Shewanella sp. ANA-3 0.73 Shewana3_3476 rihA ribonucleoside hydrolase 1 (RefSeq) 0.34 Shewana3_1424 phospholipase D/transphosphatidylase (RefSeq) low > 73
Sinorhizobium meliloti 1021 0.43 SMc01105 uridine nucleosidase (EC 3.2.2.3) (from data) 0.29 SMc04448 hypothetical protein low > 103
Dinoroseobacter shibae DFL-12 0.42 Dshi_1158 Inosine/uridine-preferring nucleoside hydrolase (RefSeq) 0.44 Dshi_0421 phospholipase D/Transphosphatidylase (RefSeq) low > 64
Agrobacterium fabrum C58 0.40 Atu0374 inosine-uridine preferring nucleoside hydrolase 0.32 Atu1630 phospholipase D family protein low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2248 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.43 GFF2697 Cardiolipin synthetase (EC 2.7.8.-) 0.34 36
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.26 AO353_09185 phospholipase low > 101
Variovorax sp. SCN45 0.34 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.28 GFF1129 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC low > 127
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) 0.29 Pf1N1B4_2134 Cardiolipin synthetase (EC 2.7.8.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.29 Pf6N2E2_4385 Cardiolipin synthetase (EC 2.7.8.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00940 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.29 AO356_12590 phospholipase low > 104
Pseudomonas sp. RS175 0.33 PFR28_02731 Pyrimidine-specific ribonucleoside hydrolase RihB 0.28 PFR28_04405 Cardiolipin synthase C low > 88
Pseudomonas simiae WCS417 0.33 PS417_18375 hypothetical protein 0.29 PS417_27735 phospholipase low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20350 nucleoside hydrolase 0.29 PFLU_RS29410 phospholipase D family protein low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20350 nucleoside hydrolase 0.29 PFLU_RS29410 phospholipase D family protein low > 109
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3906 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.28 PfGW456L13_2901 Cardiolipin synthetase (EC 2.7.8.-) low > 87
Pseudomonas putida KT2440 0.33 PP_2460 ribonucleoside hydrolase 0.28 PP_5276 Phospholipase D family protein low > 96
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1203.1 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.33 Xcc-8004.1767.1 cardiolipin synthase low > 74
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS11810 nucleoside hydrolase 0.34 LRK54_RS15280 phospholipase D family protein low > 59
Rhodanobacter denitrificans MT42 0.19 LRK55_RS11535 nucleoside hydrolase 0.34 LRK55_RS14995 phospholipase D family protein low > 63

Not shown: 15 genomes with orthologs for ECD_00617 only; 19 genomes with orthologs for ECD_01043 only