Conservation of cofitness between ECD_02026 and ECD_00093 in Escherichia coli BL21

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02026 nucleoside transporter, low affinity 1.0 ECD_00093 D-alanine:D-alanine ligase 0.57 41
Escherichia coli BW25113 1.00 b2098 yegT predicted nucleoside transporter (NCBI) 1.00 b0092 ddlB D-alanylalanine synthetase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_15440 yegT Putative nucleoside transporter YegT 1.00 NOLOHH_02970 ddlB D-alanine--D-alanine ligase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01612 Putative nucleoside transporter YegT 1.00 OHPLBJKB_03567 D-alanine--D-alanine ligase B low > 73
Escherichia coli ECOR38 1.00 HEPCGN_02785 yegT Putative nucleoside transporter YegT 0.99 HEPCGN_08605 ddlB D-alanine--D-alanine ligase low > 87
Escherichia fergusonii Becca 1.00 EFB2_01759 Putative nucleoside transporter YegT 0.99 EFB2_03955 D-alanine--D-alanine ligase B low > 86
Escherichia coli ECRC62 0.99 BNILDI_14355 yegT Putative nucleoside transporter YegT 1.00 BNILDI_08640 ddlB D-alanine--D-alanine ligase low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12310 nucleoside permease 0.98 ECOLIN_RS00490 D-alanine--D-alanine ligase low > 55
Escherichia coli ECRC102 0.99 NIAGMN_22045 yegT Putative nucleoside transporter YegT 0.99 NIAGMN_08475 ddlB D-alanine--D-alanine ligase — —
Escherichia coli ECRC99 0.99 KEDOAH_04050 yegT Putative nucleoside transporter YegT 0.99 KEDOAH_17530 ddlB D-alanine--D-alanine ligase — —
Escherichia coli ECRC98 0.99 JDDGAC_28210 yegT Putative nucleoside transporter YegT 0.99 JDDGAC_14220 ddlB D-alanine--D-alanine ligase low > 86
Escherichia coli ECRC101 0.99 MCAODC_21060 yegT Putative nucleoside transporter YegT 0.99 MCAODC_01140 ddlB D-alanine--D-alanine ligase low > 87
Escherichia coli ECRC100 0.99 OKFHMN_24100 yegT Putative nucleoside transporter YegT 0.99 OKFHMN_10625 ddlB D-alanine--D-alanine ligase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3838 Putative nucleoside transporter YegT 0.91 GFF146 D-alanine--D-alanine ligase (EC 6.3.2.4) low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0473 nucleoside transporter 0.85 EX28DRAFT_3687 D-alanine--D-alanine ligase low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03072 Putative nucleoside transporter YegT 0.86 MPMX20_00785 D-alanine--D-alanine ligase B low > 85
Pectobacterium carotovorum WPP14 0.85 HER17_RS16085 nucleoside permease 0.72 HER17_RS03170 D-alanine--D-alanine ligase — —
Alteromonas macleodii MIT1002 0.40 MIT1002_00366 Putative nucleoside transporter YegT 0.52 MIT1002_03023 D-alanine--D-alanine ligase — —
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS15375 2-hydroxy-3-keto-glucal / 2-hydroxy-3-keto-galactal transporter (from data) 0.29 CA265_RS08095 D-alanine--D-alanine ligase A — —
Pseudomonas sp. RS175 0.35 PFR28_02581 Putative nucleoside transporter YegT 0.50 PFR28_03585 D-alanine--D-alanine ligase — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4098 Putative nucleoside transporter yegT 0.51 Pf1N1B4_941 D-alanine--D-alanine ligase (EC 6.3.2.4) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_1845 2-hydroxy-3-keto-glucal transporter (from data) 0.28 Echvi_0693 D-alanine--D-alanine ligase — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS01680 nucleoside permease 0.47 ABZR86_RS11320 D-alanine--D-alanine ligase — —
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_22300 MFS transporter 0.50 AO356_17170 D-alanine--D-alanine ligase — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_326 Putative nucleoside transporter YegT 0.50 Pf6N2E2_5358 D-alanine--D-alanine ligase (EC 6.3.2.4) — —
Klebsiella michiganensis M5al 0.31 BWI76_RS07365 MFS transporter 0.83 BWI76_RS04770 D-alanine--D-alanine ligase low > 92
Pantoea sp. MT58 0.30 IAI47_20340 MFS transporter 0.68 IAI47_15920 D-alanine--D-alanine ligase low > 76
Rahnella sp. WP5 0.30 EX31_RS16880 MFS transporter 0.72 EX31_RS03595 D-alanine--D-alanine ligase — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_0554 Nucleoside H+ symporter 0.29 Ga0059261_3468 D-alanine--D-alanine ligase (EC 6.3.2.4) — —
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS12620 MFS transporter 0.28 HMPREF1078_RS12635 D-alanine--D-alanine ligase — —
Erwinia tracheiphila SCR3 0.22 LU632_RS17835 MFS transporter 0.72 LU632_RS02960 D-alanine--D-alanine ligase — —
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_01700 nucleoside permease 0.27 CCNA_02626 D-alanine--D-alanine ligase — —
Caulobacter crescentus NA1000 0.16 CCNA_01700 2-hydroxy-3-keto-glucal / 2-hydroxy-3-keto-galactal transporter (from data) 0.27 CCNA_02626 D-alanine--D-alanine ligase — —

Not shown: 4 genomes with orthologs for ECD_02026 only; 51 genomes with orthologs for ECD_00093 only