Conservation of cofitness between DZA65_RS20275 and DZA65_RS21470 in Dickeya dianthicola ME23

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS20275 homoserine O-succinyltransferase 1.0 DZA65_RS21470 cystathionine gamma-synthase 0.98 1
Dickeya dianthicola 67-19 1.00 HGI48_RS19155 homoserine O-succinyltransferase 0.99 HGI48_RS20425 cystathionine gamma-synthase 0.98 1
Dickeya dadantii 3937 0.98 DDA3937_RS19065 homoserine O-succinyltransferase 0.98 DDA3937_RS00950 cystathionine gamma-synthase 0.98 1
Pectobacterium carotovorum WPP14 0.91 HER17_RS02285 homoserine O-succinyltransferase 0.92 HER17_RS00910 cystathionine gamma-synthase 0.99 1
Serratia liquefaciens MT49 0.90 IAI46_23200 homoserine O-succinyltransferase 0.83 IAI46_24540 cystathionine gamma-synthase low > 86
Rahnella sp. WP5 0.87 EX31_RS11735 homoserine O-succinyltransferase 0.77 EX31_RS14215 cystathionine gamma-synthase 0.99 7
Erwinia tracheiphila SCR3 0.84 LU632_RS22410 metA homoserine O-succinyltransferase 0.86 LU632_RS19640 metB cystathionine gamma-synthase 0.96 2
Escherichia coli Nissle 1917 0.83 ECOLIN_RS25515 homoserine O-succinyltransferase 0.86 ECOLIN_RS22725 cystathionine gamma-synthase — —
Escherichia fergusonii Becca 0.83 EFB2_04597 Homoserine O-succinyltransferase 0.86 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli ECOR27 0.83 NOLOHH_05420 metA homoserine O-succinyltransferase 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.95 17
Escherichia coli ECRC62 0.83 BNILDI_06100 metA homoserine O-succinyltransferase 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.98 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04037 Homoserine O-succinyltransferase 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli BW25113 0.83 b4013 metA homoserine O-succinyltransferase (NCBI) 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.97 1
Escherichia coli ECRC100 0.83 OKFHMN_13275 metA homoserine O-succinyltransferase 0.86 OKFHMN_13675 metB cystathionine gamma-synthase 0.98 1
Escherichia coli ECRC99 0.83 KEDOAH_14885 metA homoserine O-succinyltransferase 0.86 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC102 0.83 NIAGMN_11025 metA homoserine O-succinyltransferase 0.86 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia coli ECRC101 0.83 MCAODC_03775 metA homoserine O-succinyltransferase 0.86 MCAODC_04175 metB cystathionine gamma-synthase 0.97 4
Escherichia coli ECRC98 0.83 JDDGAC_16900 metA homoserine O-succinyltransferase 0.86 JDDGAC_17300 metB cystathionine gamma-synthase 0.96 9
Escherichia coli ECOR38 0.83 HEPCGN_11915 metA homoserine O-succinyltransferase 0.86 HEPCGN_12345 metB cystathionine gamma-synthase 0.91 51
Pantoea sp. MT58 0.83 IAI47_18015 homoserine O-succinyltransferase 0.80 IAI47_00880 cystathionine gamma-synthase 0.98 1
Escherichia coli BL21 0.83 ECD_03885 homoserine O-transsuccinylase 0.86 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.75 9
Klebsiella michiganensis M5al 0.83 BWI76_RS01655 homoserine O-succinyltransferase 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.94 5
Enterobacter sp. TBS_079 0.83 MPMX20_00230 Homoserine O-succinyltransferase 0.86 MPMX20_04531 Cystathionine gamma-synthase 0.97 1
Enterobacter asburiae PDN3 0.83 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.86 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.96 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_08100 homoserine O-succinyltransferase 0.59 CSW01_13550 O-succinylhomoserine (thiol)-lyase low > 62
Shewanella amazonensis SB2B 0.58 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.59 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.99 1
Shewanella loihica PV-4 0.58 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.58 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.95 1
Shewanella oneidensis MR-1 0.58 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.57 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.99 2
Shewanella sp. ANA-3 0.58 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.58 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.93 16
Agrobacterium fabrum C58 0.43 Atu2718 homoserine O-succinyltransferase 0.26 Atu3806 methionine gamma-lyase low > 89
Sinorhizobium meliloti 1021 0.42 SMc03797 homoserine O-succinyltransferase 0.51 SMc02595 cystathionine gamma-synthase low > 103
Bifidobacterium breve UCC2003 0.40 BBR_RS11990 homoserine O-succinyltransferase 0.36 BBR_RS13145 cystathionine gamma-synthase low > 34
Dinoroseobacter shibae DFL-12 0.40 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) 0.29 Dshi_1002 Cystathionine gamma-synthase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS42530 homoserine O-succinyltransferase 0.31 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153

Not shown: 11 genomes with orthologs for DZA65_RS20275 only; 27 genomes with orthologs for DZA65_RS21470 only