Conservation of cofitness between DZA65_RS16955 and DZA65_RS19375 in Dickeya dianthicola ME23

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS16955 uracil-DNA glycosylase 1.0 DZA65_RS19375 LysE family transporter 0.40 12
Dickeya dadantii 3937 0.97 DDA3937_RS15790 uracil-DNA glycosylase 0.98 DDA3937_RS18300 LysE family translocator low > 74
Pectobacterium carotovorum WPP14 0.87 HER17_RS05755 uracil-DNA glycosylase 0.82 HER17_RS02915 LysE family translocator low > 75
Serratia liquefaciens MT49 0.82 IAI46_19620 uracil-DNA glycosylase 0.81 IAI46_03210 LysE family translocator 0.37 44
Rahnella sp. WP5 0.82 EX31_RS21775 uracil-DNA glycosylase 0.77 EX31_RS03810 LysE family translocator low > 89
Alteromonas macleodii MIT1002 0.64 MIT1002_03083 Uracil-DNA glycosylase 0.27 MIT1002_02144 Threonine efflux protein low > 70
Shewanella sp. ANA-3 0.62 Shewana3_3221 uracil-DNA glycosylase (RefSeq) 0.31 Shewana3_0531 lysine exporter protein LysE/YggA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.61 SO3654 ung uracil-DNA glycosylase (NCBI ptt file) 0.31 SO0530 transporter, LysE family (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3309 Uracil-DNA glycosylase, family 1 0.32 Pf1N1B4_2955 L-lysine permease low > 87
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_04635 uracil-DNA glycosylase 0.30 AO356_06930 lysine transporter LysE low > 104
Pseudomonas sp. S08-1 0.58 OH686_05820 uracil-DNA glycosylase 0.34 OH686_11605 Threonine efflux protein low > 80
Pseudomonas sp. RS175 0.58 PFR28_00677 Uracil-DNA glycosylase 0.30 PFR28_03621 Threonine efflux protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_2772 Uracil-DNA glycosylase, family 1 0.29 Pf6N2E2_3245 L-lysine permease low > 103
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_17560 uracil-DNA glycosylase 0.31 AO353_15005 lysine transporter LysE low > 101
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_4530 Uracil-DNA glycosylase, family 1 0.33 PfGW456L13_3624 L-lysine permease low > 87
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_1441 Uracil-DNA glycosylase (EC 3.2.2.-) 0.30 B158DRAFT_0068 Putative threonine efflux protein low > 40
Pseudomonas simiae WCS417 0.57 PS417_07035 uracil-DNA glycosylase 0.30 PS417_04535 lysine transporter LysE low > 88
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS07110 uracil-DNA glycosylase 0.30 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS07110 uracil-DNA glycosylase 0.30 PFLU_RS04580 lysine transporter LysE low > 109
Marinobacter adhaerens HP15 0.56 HP15_769 uracil-DNA glycosylase 0.24 HP15_1044 lysine exporter protein (LYSE/YGGA) low > 73
Pseudomonas stutzeri RCH2 0.56 Psest_3107 uracil-DNA glycosylase 0.32 Psest_3222 Putative threonine efflux protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_3970 Uracil-DNA glycosylase 0.29 Psyr_0989 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_3970 Uracil-DNA glycosylase 0.29 Psyr_0989 Lysine exporter protein (LYSE/YGGA) low > 86
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_12930 ung uracil-DNA glycosylase 0.23 OKGIIK_13285 LysE type translocator low > 52
Pseudomonas putida KT2440 0.54 PP_1413 Uracil-DNA glycosylase 0.30 PP_0699 Transporter, LysE family low > 96
Sinorhizobium meliloti 1021 0.54 SMc03195 uracil-DNA glycosylase 0.30 SMc02484 amino acid efflux transmembrane protein 0.26 39
Agrobacterium fabrum C58 0.51 Atu2455 uracil-DNA glycosylase 0.29 Atu2633 RhtB family transporter low > 89
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS18320 uracil-DNA glycosylase 0.27 RR42_RS21510 lysine transporter LysE — —

Not shown: 52 genomes with orthologs for DZA65_RS16955 only; 4 genomes with orthologs for DZA65_RS19375 only