Conservation of cofitness between DZA65_RS20275 and DZA65_RS01785 in Dickeya dianthicola ME23

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS20275 homoserine O-succinyltransferase 1.0 DZA65_RS01785 cystathionine beta-lyase 0.95 2
Dickeya dianthicola 67-19 1.00 HGI48_RS19155 homoserine O-succinyltransferase 0.99 HGI48_RS01710 cystathionine beta-lyase 0.91 6
Dickeya dadantii 3937 0.98 DDA3937_RS19065 homoserine O-succinyltransferase 0.98 DDA3937_RS01815 cystathionine beta-lyase 0.95 10
Pectobacterium carotovorum WPP14 0.91 HER17_RS02285 homoserine O-succinyltransferase 0.85 HER17_RS19690 cystathionine beta-lyase 0.97 15
Serratia liquefaciens MT49 0.90 IAI46_23200 homoserine O-succinyltransferase 0.80 IAI46_21725 cystathionine beta-lyase low > 86
Rahnella sp. WP5 0.87 EX31_RS11735 homoserine O-succinyltransferase 0.80 EX31_RS08025 cystathionine beta-lyase low > 89
Erwinia tracheiphila SCR3 0.84 LU632_RS22410 metA homoserine O-succinyltransferase 0.74 LU632_RS20545 metC cystathionine beta-lyase 0.96 1
Escherichia coli Nissle 1917 0.83 ECOLIN_RS25515 homoserine O-succinyltransferase 0.76 ECOLIN_RS17315 cystathionine beta-lyase — —
Escherichia fergusonii Becca 0.83 EFB2_04597 Homoserine O-succinyltransferase 0.76 EFB2_00802 Cystathionine beta-lyase MetC low > 86
Escherichia coli ECOR27 0.83 NOLOHH_05420 metA homoserine O-succinyltransferase 0.77 NOLOHH_10735 metC cystathionine beta-lyase 0.93 28
Escherichia coli ECRC62 0.83 BNILDI_06100 metA homoserine O-succinyltransferase 0.77 BNILDI_00780 metC cystathionine beta-lyase 0.96 6
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04037 Homoserine O-succinyltransferase 0.77 OHPLBJKB_00693 Cystathionine beta-lyase MetC low > 73
Escherichia coli ECRC100 0.83 OKFHMN_13275 metA homoserine O-succinyltransferase 0.76 OKFHMN_18960 metC cystathionine beta-lyase 0.95 25
Escherichia coli ECRC101 0.83 MCAODC_03775 metA homoserine O-succinyltransferase 0.76 MCAODC_09475 metC cystathionine beta-lyase 0.97 3
Escherichia coli ECOR38 0.83 HEPCGN_11915 metA homoserine O-succinyltransferase 0.76 HEPCGN_17825 metC cystathionine beta-lyase 0.96 26
Escherichia coli ECRC99 0.83 KEDOAH_14885 metA homoserine O-succinyltransferase 0.76 KEDOAH_09185 metC cystathionine beta-lyase — —
Escherichia coli ECRC102 0.83 NIAGMN_11025 metA homoserine O-succinyltransferase 0.76 NIAGMN_16725 metC cystathionine beta-lyase — —
Escherichia coli ECRC98 0.83 JDDGAC_16900 metA homoserine O-succinyltransferase 0.76 JDDGAC_22595 metC cystathionine beta-lyase 0.98 2
Escherichia coli BW25113 0.83 b4013 metA homoserine O-succinyltransferase (NCBI) 0.76 b3008 metC cystathionine beta-lyase (NCBI) 0.91 3
Escherichia coli BL21 0.83 ECD_03885 homoserine O-transsuccinylase 0.76 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.72 21
Pantoea sp. MT58 0.83 IAI47_18015 homoserine O-succinyltransferase 0.75 IAI47_03215 cystathionine beta-lyase low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_00230 Homoserine O-succinyltransferase 0.75 MPMX20_03852 Cystathionine beta-lyase MetC 0.95 3
Klebsiella michiganensis M5al 0.83 BWI76_RS01655 homoserine O-succinyltransferase 0.75 BWI76_RS24285 cystathionine beta-lyase 0.94 6
Enterobacter asburiae PDN3 0.83 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.74 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.96 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) 0.75 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_08100 homoserine O-succinyltransferase 0.63 CSW01_08400 cystathionine beta-lyase low > 62
Shewanella amazonensis SB2B 0.58 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.54 Sama_2008 cystathionine beta-lyase (RefSeq) low > 62
Shewanella loihica PV-4 0.58 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.57 Shew_1789 cystathionine beta-lyase (RefSeq) 0.93 16
Shewanella oneidensis MR-1 0.58 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.55 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.97 9
Shewanella sp. ANA-3 0.58 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.55 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.89 38
Agrobacterium fabrum C58 0.43 Atu2718 homoserine O-succinyltransferase 0.36 Atu1575 cystathionine beta lyase low > 89
Phaeobacter inhibens DSM 17395 0.43 PGA1_c14560 homoserine O-succinyltransferase MetA 0.21 PGA1_c16720 putative pyridoxal phosphate-dependent transferase low > 62
Rhizobium sp. OAE497 0.42 ABIE40_RS18590 homoserine O-succinyltransferase 0.39 ABIE40_RS08820 cystathionine beta-lyase low > 107
Sinorhizobium meliloti 1021 0.42 SMc03797 homoserine O-succinyltransferase 0.38 SMc02117 cystathionine beta-lyase 0.63 99
Azospirillum brasilense Sp245 0.40 AZOBR_RS14010 homoserine O-succinyltransferase 0.42 AZOBR_RS08650 cystathionine beta-lyase low > 97
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS42530 homoserine O-succinyltransferase 0.34 QEN71_RS22165 cystathionine beta-lyase low > 153

Not shown: 10 genomes with orthologs for DZA65_RS20275 only; 27 genomes with orthologs for DZA65_RS01785 only