Conservation of cofitness between CSW01_04865 and CSW01_17340 in Vibrio cholerae E7946 ATCC 55056

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 1.0 CSW01_17340 23S rRNA methyltransferase 0.55 1
Shewanella loihica PV-4 0.82 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 0.55 Shew_2412 tRNA/rRNA methyltransferase (SpoU) (RefSeq) low > 60
Shewanella sp. ANA-3 0.82 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.53 Shewana3_1473 tRNA/rRNA methyltransferase (SpoU) (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.52 SO3075 RNA methyltransferase, TrmH family, putative (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.77 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.45 MIT1002_01957 SpoU rRNA Methylase family protein — —
Pseudomonas sp. SVBP6 0.65 COO64_RS15615 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.46 COO64_RS22295 RNA methyltransferase low > 93
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_4366 Protein of unknown function DUF163 0.50 Psyr_1569 conserved hypothetical protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_4366 Protein of unknown function DUF163 0.50 Psyr_1569 conserved hypothetical protein low > 86
Pseudomonas stutzeri RCH2 0.65 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.50 Psest_2751 Predicted rRNA methylase (SpoU class) low > 67
Pseudomonas sp. RS175 0.65 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.48 PFR28_00719 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.47 Pf6N2E2_2720 tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) low > 103
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_15305 50S rRNA methyltransferase 0.48 AO356_04385 23S rRNA methyltransferase low > 104
Pseudomonas sp. BP01 0.65 JOY50_RS17695 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.46 JOY50_RS01495 RNA methyltransferase low > 84
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_06480 50S rRNA methyltransferase 0.48 AO353_17890 23S rRNA methyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.48 Pf1N1B4_3352 tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.49 PfGW456L13_4489 tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34) low > 87
Pseudomonas putida KT2440 0.64 PP_4808 23S rRNA m3psi1915 methyltransferase 0.46 PP_4585 RNA methyltransferase, TrmH family 0.14 30
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 PFLU_RS07500 RNA methyltransferase low > 109
Pseudomonas simiae WCS417 0.64 PS417_24730 50S rRNA methyltransferase 0.48 PS417_07415 23S rRNA methyltransferase — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.48 PFLU_RS07500 RNA methyltransferase low > 109
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_05099 Ribosomal RNA large subunit methyltransferase H 0.48 GEMAOFIL_01616 hypothetical protein — —
Dechlorosoma suillum PS 0.44 Dsui_0451 hypothetical protein 0.45 Dsui_2206 putative rRNA methylase SpoU family low > 51

Not shown: 89 genomes with orthologs for CSW01_04865 only; 0 genomes with orthologs for CSW01_17340 only